Strain Fitness in Shewanella amazonensis SB2B around Sama_0356

Experiment: Bacitracin 0.25 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmurC and Sama_0356 are separated by 112 nucleotidesSama_0356 and Sama_0357 are separated by 3 nucleotides Sama_0355: murC - UDP-N-acetylmuramate--L-alanine ligase (RefSeq), at 425,464 to 426,918 murC Sama_0356: Sama_0356 - cell division protein FtsQ (RefSeq), at 427,031 to 427,855 _0356 Sama_0357: Sama_0357 - cell division protein FtsA (RefSeq), at 427,859 to 429,094 _0357 Position (kb) 427 428Strain fitness (log2 ratio) -2 -1 0 1at 426.854 kb on + strandat 426.854 kb on + strandat 426.854 kb on + strandat 426.854 kb on + strandat 426.854 kb on + strandat 426.854 kb on + strandat 426.854 kb on + strandat 426.854 kb on + strandat 426.854 kb on + strandat 426.985 kb on + strandat 426.985 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml
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426,854 + -1.0
426,854 + -2.1
426,854 + -2.5
426,854 + -1.0
426,854 + -0.1
426,854 + -2.3
426,854 + -1.9
426,854 + -0.6
426,854 + -1.4
426,985 + -1.0
426,985 + -2.4

Or see this region's nucleotide sequence