Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0866 and Psest_0867 are separated by 134 nucleotides Psest_0867 and Psest_0868 are separated by 45 nucleotides Psest_0868 and Psest_0869 are separated by 174 nucleotides
Psest_0866: Psest_0866 - ATP-dependent transcriptional regulator, at 940,611 to 943,421
_0866
Psest_0867: Psest_0867 - hypothetical protein, at 943,556 to 943,984
_0867
Psest_0868: Psest_0868 - Glutathione S-transferase, at 944,030 to 944,653
_0868
Psest_0869: Psest_0869 - Acetyltransferase (isoleucine patch superfamily), at 944,828 to 945,376
_0869
Position (kb)
943
944 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 942.568 kb on - strand, within Psest_0866 at 942.601 kb on - strand, within Psest_0866 at 943.342 kb on - strand at 943.342 kb on - strand at 943.342 kb on - strand at 943.420 kb on - strand at 943.465 kb on - strand at 943.540 kb on - strand at 943.605 kb on - strand, within Psest_0867 at 943.716 kb on + strand, within Psest_0867 at 943.717 kb on - strand, within Psest_0867 at 943.957 kb on - strand at 943.957 kb on - strand at 944.325 kb on + strand, within Psest_0868 at 944.325 kb on + strand, within Psest_0868 at 944.325 kb on + strand, within Psest_0868 at 944.325 kb on + strand, within Psest_0868 at 944.325 kb on + strand, within Psest_0868 at 944.326 kb on - strand, within Psest_0868 at 944.326 kb on - strand, within Psest_0868 at 944.328 kb on + strand, within Psest_0868 at 944.582 kb on + strand, within Psest_0868 at 944.582 kb on + strand, within Psest_0868 at 944.582 kb on + strand, within Psest_0868 at 944.582 kb on + strand, within Psest_0868 at 944.583 kb on - strand, within Psest_0868 at 944.632 kb on + strand at 944.632 kb on + strand at 944.632 kb on + strand at 944.632 kb on + strand at 944.632 kb on + strand at 944.632 kb on + strand at 944.632 kb on + strand at 944.632 kb on + strand at 944.632 kb on + strand at 944.632 kb on + strand at 944.632 kb on + strand at 944.632 kb on + strand at 944.632 kb on + strand at 944.632 kb on + strand at 944.633 kb on - strand at 944.633 kb on - strand at 944.633 kb on - strand at 944.633 kb on - strand at 944.633 kb on - strand at 944.633 kb on - strand at 944.633 kb on - strand at 944.633 kb on - strand at 944.633 kb on - strand at 944.633 kb on - strand at 944.634 kb on + strand at 944.634 kb on + strand at 944.634 kb on + strand at 944.870 kb on + strand at 944.870 kb on + strand at 944.870 kb on + strand at 944.870 kb on + strand at 944.871 kb on - strand at 944.871 kb on - strand at 944.871 kb on - strand at 944.871 kb on - strand at 944.874 kb on - strand at 944.933 kb on + strand, within Psest_0869
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 942,568 - Psest_0866 0.70 -0.3 942,601 - Psest_0866 0.71 -0.0 943,342 - +1.4 943,342 - -0.1 943,342 - +0.0 943,420 - +1.7 943,465 - +0.7 943,540 - +0.3 943,605 - Psest_0867 0.11 -1.0 943,716 + Psest_0867 0.37 -0.0 943,717 - Psest_0867 0.38 -2.3 943,957 - +0.9 943,957 - +0.1 944,325 + Psest_0868 0.47 -0.2 944,325 + Psest_0868 0.47 +0.7 944,325 + Psest_0868 0.47 +0.2 944,325 + Psest_0868 0.47 +0.9 944,325 + Psest_0868 0.47 -0.8 944,326 - Psest_0868 0.47 -0.5 944,326 - Psest_0868 0.47 -1.0 944,328 + Psest_0868 0.48 +0.5 944,582 + Psest_0868 0.88 -0.4 944,582 + Psest_0868 0.88 +0.4 944,582 + Psest_0868 0.88 +0.5 944,582 + Psest_0868 0.88 -0.1 944,583 - Psest_0868 0.89 +1.1 944,632 + +2.6 944,632 + +0.7 944,632 + -0.8 944,632 + -0.5 944,632 + -0.8 944,632 + +0.2 944,632 + -0.8 944,632 + -0.3 944,632 + +0.7 944,632 + -0.1 944,632 + -1.3 944,632 + +0.5 944,632 + -0.7 944,632 + -0.7 944,633 - +0.6 944,633 - -1.5 944,633 - +0.0 944,633 - +1.2 944,633 - -1.2 944,633 - +1.4 944,633 - +0.0 944,633 - +0.0 944,633 - +0.3 944,633 - +1.0 944,634 + -0.5 944,634 + +0.3 944,634 + -0.3 944,870 + +1.3 944,870 + -0.2 944,870 + -1.0 944,870 + -1.1 944,871 - +0.2 944,871 - -1.3 944,871 - +0.7 944,871 - +1.3 944,874 - +0.9 944,933 + Psest_0869 0.19 +0.8
Or see this region's nucleotide sequence