Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0695 and Psest_0696 are separated by 34 nucleotides Psest_0696 and Psest_0697 are separated by 21 nucleotides Psest_0697 and Psest_0698 are separated by 103 nucleotides
Psest_0695: Psest_0695 - ribosomal protein S18, at 760,181 to 760,411
_0695
Psest_0696: Psest_0696 - hypothetical protein, at 760,446 to 761,339
_0696
Psest_0697: Psest_0697 - ribosomal protein L9, at 761,361 to 761,807
_0697
Psest_0698: Psest_0698 - replicative DNA helicase, at 761,911 to 763,305
_0698
Position (kb) 761
762 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 760.729 kb on + strand, within Psest_0696 at 760.729 kb on + strand, within Psest_0696 at 760.729 kb on + strand, within Psest_0696 at 760.730 kb on - strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.756 kb on - strand, within Psest_0696 at 760.986 kb on + strand, within Psest_0696 at 760.987 kb on - strand, within Psest_0696 at 761.131 kb on + strand, within Psest_0696 at 761.205 kb on + strand, within Psest_0696 at 761.205 kb on + strand, within Psest_0696 at 761.205 kb on + strand, within Psest_0696 at 761.205 kb on + strand, within Psest_0696 at 761.206 kb on - strand, within Psest_0696 at 761.543 kb on + strand, within Psest_0697 at 761.740 kb on - strand, within Psest_0697 at 761.746 kb on + strand, within Psest_0697 at 761.746 kb on + strand, within Psest_0697 at 761.746 kb on + strand, within Psest_0697 at 761.746 kb on + strand, within Psest_0697 at 761.746 kb on + strand, within Psest_0697 at 761.746 kb on + strand, within Psest_0697 at 761.747 kb on - strand, within Psest_0697 at 761.890 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 760,729 + Psest_0696 0.32 +1.6 760,729 + Psest_0696 0.32 +2.3 760,729 + Psest_0696 0.32 +2.0 760,730 - Psest_0696 0.32 -3.2 760,755 + Psest_0696 0.35 +1.0 760,755 + Psest_0696 0.35 +2.0 760,755 + Psest_0696 0.35 -0.1 760,755 + Psest_0696 0.35 +2.4 760,755 + Psest_0696 0.35 +1.8 760,755 + Psest_0696 0.35 +1.4 760,755 + Psest_0696 0.35 +1.5 760,755 + Psest_0696 0.35 +0.8 760,755 + Psest_0696 0.35 +1.2 760,755 + Psest_0696 0.35 +0.8 760,756 - Psest_0696 0.35 -3.8 760,986 + Psest_0696 0.60 +1.7 760,987 - Psest_0696 0.61 -1.1 761,131 + Psest_0696 0.77 +1.5 761,205 + Psest_0696 0.85 +1.5 761,205 + Psest_0696 0.85 -2.4 761,205 + Psest_0696 0.85 +1.8 761,205 + Psest_0696 0.85 +1.6 761,206 - Psest_0696 0.85 -2.1 761,543 + Psest_0697 0.41 -2.1 761,740 - Psest_0697 0.85 -1.4 761,746 + Psest_0697 0.86 -3.0 761,746 + Psest_0697 0.86 -3.0 761,746 + Psest_0697 0.86 -3.7 761,746 + Psest_0697 0.86 -2.3 761,746 + Psest_0697 0.86 -3.2 761,746 + Psest_0697 0.86 -2.6 761,747 - Psest_0697 0.86 -4.1 761,890 + -1.8
Or see this region's nucleotide sequence