Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0662
Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.016 mg/ml |
---|---|---|---|---|---|
remove | |||||
719,686 | + | Psest_0661 | 0.61 | +0.6 | |
719,686 | + | Psest_0661 | 0.61 | +0.6 | |
719,686 | + | Psest_0661 | 0.61 | +0.3 | |
719,687 | - | Psest_0661 | 0.61 | +1.6 | |
719,687 | - | Psest_0661 | 0.61 | +0.6 | |
719,687 | - | Psest_0661 | 0.61 | -0.1 | |
720,712 | + | Psest_0662 | 0.33 | -0.8 | |
720,760 | + | Psest_0662 | 0.41 | -2.0 | |
720,760 | + | Psest_0662 | 0.41 | -0.2 | |
720,761 | - | Psest_0662 | 0.41 | -0.8 | |
721,091 | + | +0.2 | |||
721,255 | + | +1.7 | |||
721,256 | - | +1.3 | |||
721,343 | + | -1.4 | |||
721,619 | + | Psest_0663 | 0.22 | +0.4 | |
721,619 | + | Psest_0663 | 0.22 | +0.2 | |
721,620 | - | Psest_0663 | 0.22 | +0.5 | |
721,620 | - | Psest_0663 | 0.22 | +0.9 | |
721,620 | - | Psest_0663 | 0.22 | -0.4 | |
721,620 | - | Psest_0663 | 0.22 | +0.8 | |
721,845 | + | Psest_0663 | 0.35 | +1.8 |
Or see this region's nucleotide sequence