Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3747

Experiment: Fusidic 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_3746 and Psest_3747 are separated by 16 nucleotidesPsest_3747 and Psest_3748 overlap by 4 nucleotides Psest_3746: Psest_3746 - Uncharacterized enzyme of heme biosynthesis, at 3,916,900 to 3,918,078 _3746 Psest_3747: Psest_3747 - Uroporphyrinogen-III synthase, at 3,918,095 to 3,918,865 _3747 Psest_3748: Psest_3748 - porphobilinogen deaminase, at 3,918,862 to 3,919,800 _3748 Position (kb) 3918 3919Strain fitness (log2 ratio) -1 0 1at 3917.160 kb on - strand, within Psest_3746at 3918.885 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml
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3,917,160 - Psest_3746 0.22 -1.1
3,918,885 - -0.2

Or see this region's nucleotide sequence