Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2666 and Psest_2667 are separated by 122 nucleotides Psest_2667 and Psest_2668 overlap by 4 nucleotides Psest_2668 and Psest_2669 are separated by 16 nucleotides
Psest_2666: Psest_2666 - Predicted acyl-CoA transferases/carnitine dehydratase, at 2,853,388 to 2,854,593
_2666
Psest_2667: Psest_2667 - Uncharacterized protein involved in propionate catabolism, at 2,854,716 to 2,856,068
_2667
Psest_2668: Psest_2668 - Lactoylglutathione lyase and related lyases, at 2,856,065 to 2,856,568
_2668
Psest_2669: Psest_2669 - Acyl-CoA dehydrogenases, at 2,856,585 to 2,857,748
_2669
Position (kb)
2854
2855
2856
2857 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2853.873 kb on - strand, within Psest_2666 at 2853.878 kb on + strand, within Psest_2666 at 2853.878 kb on + strand, within Psest_2666 at 2853.879 kb on - strand, within Psest_2666 at 2853.879 kb on - strand, within Psest_2666 at 2853.929 kb on + strand, within Psest_2666 at 2853.930 kb on - strand, within Psest_2666 at 2853.935 kb on + strand, within Psest_2666 at 2853.938 kb on + strand, within Psest_2666 at 2853.938 kb on + strand, within Psest_2666 at 2853.938 kb on + strand, within Psest_2666 at 2853.939 kb on - strand, within Psest_2666 at 2853.939 kb on - strand, within Psest_2666 at 2853.939 kb on - strand, within Psest_2666 at 2853.947 kb on + strand, within Psest_2666 at 2854.047 kb on - strand, within Psest_2666 at 2854.047 kb on - strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.053 kb on - strand, within Psest_2666 at 2854.053 kb on - strand, within Psest_2666 at 2854.164 kb on - strand, within Psest_2666 at 2854.182 kb on - strand, within Psest_2666 at 2854.711 kb on + strand at 2855.003 kb on + strand, within Psest_2667 at 2855.003 kb on + strand, within Psest_2667 at 2855.004 kb on - strand, within Psest_2667 at 2855.004 kb on - strand, within Psest_2667 at 2855.004 kb on - strand, within Psest_2667 at 2855.007 kb on + strand, within Psest_2667 at 2855.007 kb on + strand, within Psest_2667 at 2855.627 kb on - strand, within Psest_2667 at 2855.839 kb on + strand, within Psest_2667 at 2856.138 kb on + strand, within Psest_2668 at 2856.138 kb on + strand, within Psest_2668 at 2856.402 kb on + strand, within Psest_2668 at 2856.403 kb on - strand, within Psest_2668 at 2856.403 kb on - strand, within Psest_2668 at 2856.403 kb on - strand, within Psest_2668 at 2856.403 kb on - strand, within Psest_2668 at 2856.403 kb on - strand, within Psest_2668 at 2856.464 kb on - strand, within Psest_2668 at 2856.464 kb on - strand, within Psest_2668 at 2856.572 kb on - strand at 2856.625 kb on + strand at 2856.626 kb on - strand at 2856.626 kb on - strand at 2856.664 kb on + strand at 2856.779 kb on - strand, within Psest_2669 at 2856.949 kb on + strand, within Psest_2669 at 2856.949 kb on + strand, within Psest_2669 at 2857.039 kb on + strand, within Psest_2669 at 2857.040 kb on - strand, within Psest_2669 at 2857.040 kb on - strand, within Psest_2669
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 2,853,873 - Psest_2666 0.40 -0.5 2,853,878 + Psest_2666 0.41 +2.4 2,853,878 + Psest_2666 0.41 -1.6 2,853,879 - Psest_2666 0.41 +0.1 2,853,879 - Psest_2666 0.41 -0.6 2,853,929 + Psest_2666 0.45 +1.1 2,853,930 - Psest_2666 0.45 +0.8 2,853,935 + Psest_2666 0.45 -1.2 2,853,938 + Psest_2666 0.46 +0.0 2,853,938 + Psest_2666 0.46 +0.2 2,853,938 + Psest_2666 0.46 +1.4 2,853,939 - Psest_2666 0.46 -1.6 2,853,939 - Psest_2666 0.46 -0.6 2,853,939 - Psest_2666 0.46 +0.2 2,853,947 + Psest_2666 0.46 -1.2 2,854,047 - Psest_2666 0.55 -0.5 2,854,047 - Psest_2666 0.55 +0.9 2,854,052 + Psest_2666 0.55 -1.6 2,854,052 + Psest_2666 0.55 +0.4 2,854,052 + Psest_2666 0.55 +1.2 2,854,052 + Psest_2666 0.55 +0.1 2,854,052 + Psest_2666 0.55 +0.8 2,854,052 + Psest_2666 0.55 +1.2 2,854,052 + Psest_2666 0.55 +1.2 2,854,052 + Psest_2666 0.55 +1.2 2,854,052 + Psest_2666 0.55 -0.0 2,854,052 + Psest_2666 0.55 +0.2 2,854,052 + Psest_2666 0.55 -0.2 2,854,052 + Psest_2666 0.55 +1.3 2,854,053 - Psest_2666 0.55 -0.8 2,854,053 - Psest_2666 0.55 +0.6 2,854,164 - Psest_2666 0.64 -0.1 2,854,182 - Psest_2666 0.66 -1.0 2,854,711 + -0.2 2,855,003 + Psest_2667 0.21 -0.5 2,855,003 + Psest_2667 0.21 +1.8 2,855,004 - Psest_2667 0.21 +0.2 2,855,004 - Psest_2667 0.21 +1.4 2,855,004 - Psest_2667 0.21 +0.4 2,855,007 + Psest_2667 0.22 +0.0 2,855,007 + Psest_2667 0.22 -1.2 2,855,627 - Psest_2667 0.67 -1.9 2,855,839 + Psest_2667 0.83 +0.8 2,856,138 + Psest_2668 0.14 +1.7 2,856,138 + Psest_2668 0.14 +1.4 2,856,402 + Psest_2668 0.67 +0.4 2,856,403 - Psest_2668 0.67 -0.8 2,856,403 - Psest_2668 0.67 +0.5 2,856,403 - Psest_2668 0.67 -1.6 2,856,403 - Psest_2668 0.67 +1.0 2,856,403 - Psest_2668 0.67 +1.7 2,856,464 - Psest_2668 0.79 +0.4 2,856,464 - Psest_2668 0.79 -0.6 2,856,572 - +0.3 2,856,625 + +1.9 2,856,626 - +0.2 2,856,626 - +0.2 2,856,664 + +0.6 2,856,779 - Psest_2669 0.17 +3.4 2,856,949 + Psest_2669 0.31 -1.2 2,856,949 + Psest_2669 0.31 +1.4 2,857,039 + Psest_2669 0.39 +1.8 2,857,040 - Psest_2669 0.39 +0.9 2,857,040 - Psest_2669 0.39 +0.4
Or see this region's nucleotide sequence