Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0257 and Psest_0258 are separated by 229 nucleotides Psest_0258 and Psest_0259 overlap by 4 nucleotides Psest_0259 and Psest_0260 overlap by 4 nucleotides
Psest_0257: Psest_0257 - Predicted Zn-dependent peptidases, at 270,997 to 272,349
_0257
Psest_0258: Psest_0258 - signal recognition particle-docking protein FtsY, at 272,579 to 273,859
_0258
Psest_0259: Psest_0259 - cell division ATP-binding protein FtsE, at 273,856 to 274,527
_0259
Psest_0260: Psest_0260 - Cell division protein, at 274,524 to 275,543
_0260
Position (kb) 272
273
274 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 271.731 kb on - strand, within Psest_0257 at 271.850 kb on + strand, within Psest_0257 at 272.181 kb on - strand, within Psest_0257 at 272.350 kb on - strand at 272.350 kb on - strand at 272.459 kb on + strand at 272.512 kb on + strand at 272.512 kb on + strand at 272.512 kb on + strand at 272.517 kb on + strand at 272.552 kb on + strand at 272.569 kb on + strand at 272.569 kb on + strand at 272.569 kb on + strand at 274.314 kb on - strand, within Psest_0259 at 274.347 kb on + strand, within Psest_0259
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 271,731 - Psest_0257 0.54 -0.7 271,850 + Psest_0257 0.63 -2.1 272,181 - Psest_0257 0.88 -0.9 272,350 - -0.3 272,350 - +1.5 272,459 + +1.4 272,512 + +2.1 272,512 + +0.6 272,512 + +1.1 272,517 + -0.2 272,552 + -0.5 272,569 + -0.6 272,569 + -1.2 272,569 + +1.1 274,314 - Psest_0259 0.68 -3.5 274,347 + Psest_0259 0.73 -3.4
Or see this region's nucleotide sequence