Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22780

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
2,361,264	+				-2.0
2,361,324	-				+1.0
2,361,324	-				-2.4
2,361,352	-				+0.6
2,361,361	+				-2.0
2,361,369	-				-0.1
2,361,371	-				-0.9
2,361,388	+				-3.0
2,361,426	+		PGA1_c22770	0.13	-1.4
2,361,426	+		PGA1_c22770	0.13	+0.3
2,361,434	-		PGA1_c22770	0.14	+1.1
2,361,448	-		PGA1_c22770	0.15	-1.0
2,361,460	-		PGA1_c22770	0.17	+0.3
2,361,460	-		PGA1_c22770	0.17	-1.3
2,361,488	+		PGA1_c22770	0.20	+0.4
2,361,496	-		PGA1_c22770	0.20	-1.0
2,361,559	-		PGA1_c22770	0.27	-0.3
2,361,580	-		PGA1_c22770	0.30	+1.6
2,361,603	+		PGA1_c22770	0.32	+0.1
2,361,660	+		PGA1_c22770	0.38	+0.2
2,361,688	+		PGA1_c22770	0.41	+1.1
2,361,695	+		PGA1_c22770	0.42	+0.9
2,361,696	-		PGA1_c22770	0.42	+0.0
2,361,703	-		PGA1_c22770	0.43	+0.6
2,361,731	+		PGA1_c22770	0.46	+0.7
2,361,739	-		PGA1_c22770	0.47	+0.7
2,361,822	+		PGA1_c22770	0.56	+1.0
2,361,830	-		PGA1_c22770	0.57	-0.8
2,361,842	+		PGA1_c22770	0.58	+0.6
2,361,934	-		PGA1_c22770	0.68	+1.2
2,361,996	+		PGA1_c22770	0.75	-0.1
2,361,996	+		PGA1_c22770	0.75	-0.3
2,362,006	+		PGA1_c22770	0.76	-0.4
2,362,009	-		PGA1_c22770	0.76	+0.5
2,362,014	-		PGA1_c22770	0.77	-2.7
2,362,037	+		PGA1_c22770	0.79	+0.8
2,362,046	-		PGA1_c22770	0.80	-0.3
2,362,071	-		PGA1_c22770	0.83	-0.6
2,362,077	+		PGA1_c22770	0.83	+0.4
2,362,077	+		PGA1_c22770	0.83	+1.7
2,362,085	-		PGA1_c22770	0.84	+0.5
2,362,085	-		PGA1_c22770	0.84	+0.9
2,362,085	-		PGA1_c22770	0.84	+0.3
2,362,085	-		PGA1_c22770	0.84	-0.1
2,362,140	-				+1.1
2,362,191	+				+1.0
2,362,191	+				-0.1
2,362,191	+				+0.2
2,362,191	+				-0.5
2,362,191	+				-3.4
2,362,191	+				-2.2
2,362,191	+				-0.4
2,362,199	-				+0.6
2,362,199	-				-2.7
2,362,199	-				-0.2
2,362,199	-				-1.8
2,362,199	-				+0.6
2,362,199	-				+1.9
2,362,224	+				-1.2
2,362,224	+				+1.0
2,362,224	+				-4.0
2,362,232	-				-0.7
2,362,262	+				-0.3
2,362,262	+				+0.5
2,362,270	-				+1.0
2,362,270	-				-1.1
2,362,282	+				-0.0
2,362,302	+				-0.5
2,362,325	+				-0.3
2,362,337	-				-0.1
2,362,431	+		PGA1_c22780	0.16	+0.8
2,362,478	-		PGA1_c22780	0.20	-0.1
2,362,503	+		PGA1_c22780	0.23	+0.7
2,362,553	+		PGA1_c22780	0.27	+0.3
2,362,588	-		PGA1_c22780	0.31	-0.5
2,362,618	-		PGA1_c22780	0.33	+0.4
2,362,641	+		PGA1_c22780	0.36	+0.7
2,362,645	-		PGA1_c22780	0.36	-0.7
2,362,663	+		PGA1_c22780	0.38	-2.3
2,362,718	+		PGA1_c22780	0.43	-1.7
2,362,726	-		PGA1_c22780	0.44	-1.0
2,362,806	-		PGA1_c22780	0.51	-0.2
2,362,815	-		PGA1_c22780	0.52	-1.3
2,362,835	+		PGA1_c22780	0.54	-1.0
2,362,843	-		PGA1_c22780	0.55	+0.7
2,362,843	-		PGA1_c22780	0.55	-1.2
2,362,843	-		PGA1_c22780	0.55	-0.5
2,362,855	+		PGA1_c22780	0.56	+0.8
2,362,855	+		PGA1_c22780	0.56	-1.6
2,362,863	-		PGA1_c22780	0.57	-1.7
2,362,863	-		PGA1_c22780	0.57	-2.8
2,362,863	-		PGA1_c22780	0.57	-1.0
2,362,930	+		PGA1_c22780	0.63	-0.9
2,363,020	-		PGA1_c22780	0.71	+1.4
2,363,020	-		PGA1_c22780	0.71	-0.5
2,363,035	-		PGA1_c22780	0.73	-2.7
2,363,048	+		PGA1_c22780	0.74	-1.7
2,363,053	+		PGA1_c22780	0.75	-1.0
2,363,095	+		PGA1_c22780	0.78	-0.1
2,363,116	+		PGA1_c22780	0.80	+0.3
2,363,117	+		PGA1_c22780	0.81	+1.7
2,363,137	+		PGA1_c22780	0.82	-1.7
2,363,161	+		PGA1_c22780	0.85	-1.2
2,363,218	+				-1.1
2,363,230	+				+0.1
2,363,230	+				+2.0
2,363,238	-				+0.4
2,363,247	-				-1.3
2,363,247	-				-0.7
2,363,251	+				+0.5
2,363,375	+				+0.3
2,363,375	+				+0.1
2,363,375	+				+0.7
2,363,383	-				-0.8
2,363,383	-				-0.4
2,363,417	-				+0.3
2,363,435	+				-0.5
2,363,632	-		PGA1_c22790	0.29	+1.0
2,363,643	+		PGA1_c22790	0.30	+0.2
2,363,682	-		PGA1_c22790	0.34	-0.4
2,363,714	-		PGA1_c22790	0.37	+1.4
2,363,788	+		PGA1_c22790	0.44	+0.2
2,363,788	+		PGA1_c22790	0.44	+0.4
2,363,789	+		PGA1_c22790	0.44	+0.6
2,363,789	+		PGA1_c22790	0.44	-0.8
2,363,796	-		PGA1_c22790	0.45	+1.4
2,363,831	+		PGA1_c22790	0.48	+0.7
2,363,845	-		PGA1_c22790	0.50	-0.5
2,363,845	-		PGA1_c22790	0.50	+0.6
2,363,869	+		PGA1_c22790	0.52	-1.0
2,363,872	-		PGA1_c22790	0.52	+1.6
2,363,882	-		PGA1_c22790	0.53	+0.7
2,363,911	+		PGA1_c22790	0.56	+0.2
2,363,911	+		PGA1_c22790	0.56	-0.1
2,363,911	+		PGA1_c22790	0.56	+1.4
2,363,919	-		PGA1_c22790	0.57	+0.6
2,363,919	-		PGA1_c22790	0.57	+0.3
2,363,952	+		PGA1_c22790	0.60	-2.1
2,363,982	-		PGA1_c22790	0.63	+0.3
2,363,991	+		PGA1_c22790	0.64	+0.3
2,364,041	-		PGA1_c22790	0.69	-0.3
2,364,050	+		PGA1_c22790	0.69	-1.8
2,364,058	-		PGA1_c22790	0.70	-0.0
2,364,080	+		PGA1_c22790	0.72	-3.0
2,364,093	-		PGA1_c22790	0.74	+0.3
2,364,116	+		PGA1_c22790	0.76	+1.4
2,364,124	-		PGA1_c22790	0.77	+1.5
2,364,146	-		PGA1_c22790	0.79	+1.2
2,364,180	+		PGA1_c22790	0.82	+1.7
2,364,237	+		PGA1_c22790	0.88	-2.0
2,364,237	+		PGA1_c22790	0.88	+0.5
2,364,237	+		PGA1_c22790	0.88	+1.2
2,364,237	+		PGA1_c22790	0.88	-2.3
2,364,244	+		PGA1_c22790	0.88	-2.0
2,364,245	-		PGA1_c22790	0.88	-0.2
2,364,245	-		PGA1_c22790	0.88	-0.8
2,364,245	-		PGA1_c22790	0.88	-3.0
2,364,245	-		PGA1_c22790	0.88	+0.7
2,364,245	-		PGA1_c22790	0.88	-2.6
2,364,247	-		PGA1_c22790	0.89	+1.0
2,364,247	-		PGA1_c22790	0.89	+0.9
2,364,252	-		PGA1_c22790	0.89	-0.1