Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2163 and Psest_2164 are separated by 102 nucleotides Psest_2164 and Psest_2165 are separated by 27 nucleotides Psest_2165 and Psest_2166 are separated by 16 nucleotides
Psest_2163: Psest_2163 - Transcriptional regulator, at 2,315,713 to 2,316,633
_2163
Psest_2164: Psest_2164 - Uncharacterized conserved protein, at 2,316,736 to 2,317,560
_2164
Psest_2165: Psest_2165 - Cytochrome B561, at 2,317,588 to 2,318,427
_2165
Psest_2166: Psest_2166 - Membrane proteins related to metalloendopeptidases, at 2,318,444 to 2,319,292
_2166
Position (kb)
2317
2318
2319 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2316.711 kb on + strand at 2316.712 kb on - strand at 2316.973 kb on + strand, within Psest_2164 at 2316.973 kb on + strand, within Psest_2164 at 2316.973 kb on + strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.999 kb on + strand, within Psest_2164 at 2316.999 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.004 kb on - strand, within Psest_2164 at 2317.004 kb on - strand, within Psest_2164 at 2317.004 kb on - strand, within Psest_2164 at 2317.591 kb on + strand at 2317.591 kb on + strand at 2317.889 kb on + strand, within Psest_2165 at 2318.185 kb on + strand, within Psest_2165 at 2318.185 kb on + strand, within Psest_2165 at 2318.185 kb on + strand, within Psest_2165 at 2318.185 kb on + strand, within Psest_2165 at 2318.185 kb on + strand, within Psest_2165 at 2318.186 kb on - strand, within Psest_2165 at 2318.225 kb on - strand, within Psest_2165 at 2318.273 kb on + strand, within Psest_2165 at 2318.567 kb on - strand, within Psest_2166 at 2318.697 kb on + strand, within Psest_2166 at 2318.697 kb on + strand, within Psest_2166 at 2318.697 kb on + strand, within Psest_2166 at 2318.697 kb on + strand, within Psest_2166 at 2318.697 kb on + strand, within Psest_2166 at 2318.698 kb on - strand, within Psest_2166 at 2318.698 kb on - strand, within Psest_2166 at 2318.698 kb on - strand, within Psest_2166 at 2318.698 kb on - strand, within Psest_2166 at 2318.863 kb on + strand, within Psest_2166 at 2318.863 kb on + strand, within Psest_2166 at 2318.864 kb on - strand, within Psest_2166 at 2318.895 kb on + strand, within Psest_2166 at 2318.941 kb on - strand, within Psest_2166 at 2318.952 kb on + strand, within Psest_2166 at 2318.952 kb on + strand, within Psest_2166 at 2318.953 kb on - strand, within Psest_2166 at 2319.211 kb on + strand at 2319.267 kb on + strand at 2319.271 kb on + strand at 2319.272 kb on - strand at 2319.272 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 2,316,711 + +0.4 2,316,712 - +1.5 2,316,973 + Psest_2164 0.29 -1.8 2,316,973 + Psest_2164 0.29 -1.0 2,316,973 + Psest_2164 0.29 -0.8 2,316,974 - Psest_2164 0.29 +0.9 2,316,974 - Psest_2164 0.29 +1.0 2,316,974 - Psest_2164 0.29 +1.5 2,316,974 - Psest_2164 0.29 -0.3 2,316,974 - Psest_2164 0.29 +0.3 2,316,999 + Psest_2164 0.32 -0.2 2,316,999 + Psest_2164 0.32 +0.9 2,317,003 + Psest_2164 0.32 +1.2 2,317,003 + Psest_2164 0.32 +0.7 2,317,003 + Psest_2164 0.32 +0.3 2,317,003 + Psest_2164 0.32 -0.9 2,317,003 + Psest_2164 0.32 -0.8 2,317,003 + Psest_2164 0.32 +0.5 2,317,003 + Psest_2164 0.32 -1.9 2,317,003 + Psest_2164 0.32 +0.8 2,317,003 + Psest_2164 0.32 -0.2 2,317,004 - Psest_2164 0.32 +1.2 2,317,004 - Psest_2164 0.32 +0.3 2,317,004 - Psest_2164 0.32 -0.5 2,317,591 + -2.8 2,317,591 + -0.9 2,317,889 + Psest_2165 0.36 +0.7 2,318,185 + Psest_2165 0.71 +0.0 2,318,185 + Psest_2165 0.71 +0.9 2,318,185 + Psest_2165 0.71 +0.9 2,318,185 + Psest_2165 0.71 +1.0 2,318,185 + Psest_2165 0.71 +0.2 2,318,186 - Psest_2165 0.71 +0.3 2,318,225 - Psest_2165 0.76 +2.3 2,318,273 + Psest_2165 0.82 +0.5 2,318,567 - Psest_2166 0.14 -0.9 2,318,697 + Psest_2166 0.30 +0.2 2,318,697 + Psest_2166 0.30 +1.1 2,318,697 + Psest_2166 0.30 +0.1 2,318,697 + Psest_2166 0.30 +0.7 2,318,697 + Psest_2166 0.30 +1.3 2,318,698 - Psest_2166 0.30 -1.7 2,318,698 - Psest_2166 0.30 -0.3 2,318,698 - Psest_2166 0.30 -0.8 2,318,698 - Psest_2166 0.30 +1.5 2,318,863 + Psest_2166 0.49 +0.2 2,318,863 + Psest_2166 0.49 +1.0 2,318,864 - Psest_2166 0.49 -0.5 2,318,895 + Psest_2166 0.53 -0.3 2,318,941 - Psest_2166 0.59 +1.4 2,318,952 + Psest_2166 0.60 -0.1 2,318,952 + Psest_2166 0.60 +1.1 2,318,953 - Psest_2166 0.60 -0.7 2,319,211 + +0.5 2,319,267 + +0.5 2,319,271 + +1.1 2,319,272 - -1.8 2,319,272 - +0.7
Or see this region's nucleotide sequence