Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2126 and Psest_2127 are separated by 24 nucleotides Psest_2127 and Psest_2128 are separated by 146 nucleotides
Psest_2126: Psest_2126 - Transcriptional regulators, at 2,257,670 to 2,258,689
_2126
Psest_2127: Psest_2127 - Transcriptional regulator, at 2,258,714 to 2,259,625
_2127
Psest_2128: Psest_2128 - Acyl-CoA dehydrogenases, at 2,259,772 to 2,260,998
_2128
Position (kb)
2258
2259
2260 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2257.994 kb on + strand, within Psest_2126 at 2258.108 kb on + strand, within Psest_2126 at 2258.108 kb on + strand, within Psest_2126 at 2258.108 kb on + strand, within Psest_2126 at 2258.108 kb on + strand, within Psest_2126 at 2258.109 kb on - strand, within Psest_2126 at 2258.159 kb on + strand, within Psest_2126 at 2258.160 kb on - strand, within Psest_2126 at 2258.160 kb on - strand, within Psest_2126 at 2258.319 kb on - strand, within Psest_2126 at 2258.488 kb on - strand, within Psest_2126 at 2258.488 kb on - strand, within Psest_2126 at 2258.811 kb on + strand, within Psest_2127 at 2258.811 kb on + strand, within Psest_2127 at 2258.811 kb on + strand, within Psest_2127 at 2258.811 kb on + strand, within Psest_2127 at 2258.812 kb on - strand, within Psest_2127 at 2258.812 kb on - strand, within Psest_2127 at 2258.812 kb on - strand, within Psest_2127 at 2258.812 kb on - strand, within Psest_2127 at 2258.812 kb on - strand, within Psest_2127 at 2258.812 kb on - strand, within Psest_2127 at 2258.941 kb on - strand, within Psest_2127 at 2258.941 kb on - strand, within Psest_2127 at 2258.941 kb on - strand, within Psest_2127 at 2258.941 kb on - strand, within Psest_2127 at 2259.031 kb on + strand, within Psest_2127 at 2259.031 kb on + strand, within Psest_2127 at 2259.031 kb on + strand, within Psest_2127 at 2259.031 kb on + strand, within Psest_2127 at 2259.032 kb on - strand, within Psest_2127 at 2259.032 kb on - strand, within Psest_2127 at 2259.114 kb on + strand, within Psest_2127 at 2259.403 kb on + strand, within Psest_2127 at 2259.404 kb on - strand, within Psest_2127 at 2259.573 kb on + strand at 2259.573 kb on + strand at 2259.573 kb on + strand at 2259.573 kb on + strand at 2259.573 kb on + strand at 2259.574 kb on - strand at 2259.574 kb on - strand at 2259.574 kb on - strand at 2259.596 kb on + strand at 2259.596 kb on + strand at 2259.596 kb on + strand at 2259.664 kb on + strand at 2259.665 kb on - strand at 2259.665 kb on - strand at 2259.665 kb on - strand at 2259.685 kb on + strand at 2259.686 kb on - strand at 2259.686 kb on - strand at 2259.704 kb on - strand at 2259.704 kb on - strand at 2259.726 kb on + strand at 2259.726 kb on + strand at 2259.727 kb on - strand at 2259.749 kb on + strand at 2259.750 kb on - strand at 2259.844 kb on + strand at 2260.004 kb on - strand, within Psest_2128 at 2260.207 kb on - strand, within Psest_2128
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 2,257,994 + Psest_2126 0.32 +0.3 2,258,108 + Psest_2126 0.43 -2.6 2,258,108 + Psest_2126 0.43 +0.4 2,258,108 + Psest_2126 0.43 -0.3 2,258,108 + Psest_2126 0.43 +0.5 2,258,109 - Psest_2126 0.43 -1.5 2,258,159 + Psest_2126 0.48 +0.4 2,258,160 - Psest_2126 0.48 -0.1 2,258,160 - Psest_2126 0.48 +0.7 2,258,319 - Psest_2126 0.64 -0.3 2,258,488 - Psest_2126 0.80 +0.3 2,258,488 - Psest_2126 0.80 +1.8 2,258,811 + Psest_2127 0.11 +1.0 2,258,811 + Psest_2127 0.11 +0.5 2,258,811 + Psest_2127 0.11 -1.8 2,258,811 + Psest_2127 0.11 +0.3 2,258,812 - Psest_2127 0.11 +0.8 2,258,812 - Psest_2127 0.11 +1.8 2,258,812 - Psest_2127 0.11 +1.6 2,258,812 - Psest_2127 0.11 +1.7 2,258,812 - Psest_2127 0.11 +0.9 2,258,812 - Psest_2127 0.11 +1.2 2,258,941 - Psest_2127 0.25 -2.3 2,258,941 - Psest_2127 0.25 -0.4 2,258,941 - Psest_2127 0.25 +0.3 2,258,941 - Psest_2127 0.25 +1.4 2,259,031 + Psest_2127 0.35 +0.0 2,259,031 + Psest_2127 0.35 -0.8 2,259,031 + Psest_2127 0.35 -1.2 2,259,031 + Psest_2127 0.35 -0.8 2,259,032 - Psest_2127 0.35 -0.8 2,259,032 - Psest_2127 0.35 +1.8 2,259,114 + Psest_2127 0.44 +1.2 2,259,403 + Psest_2127 0.76 +0.1 2,259,404 - Psest_2127 0.76 +0.1 2,259,573 + -0.6 2,259,573 + -0.6 2,259,573 + -1.5 2,259,573 + -0.6 2,259,573 + +0.5 2,259,574 - +1.2 2,259,574 - +0.3 2,259,574 - +0.5 2,259,596 + -1.1 2,259,596 + -2.5 2,259,596 + -2.1 2,259,664 + -0.9 2,259,665 - +0.2 2,259,665 - +0.5 2,259,665 - -1.1 2,259,685 + -0.6 2,259,686 - -0.8 2,259,686 - +0.3 2,259,704 - -0.3 2,259,704 - -0.1 2,259,726 + -1.3 2,259,726 + -0.9 2,259,727 - +0.5 2,259,749 + +0.1 2,259,750 - +0.1 2,259,844 + +0.3 2,260,004 - Psest_2128 0.19 +0.3 2,260,207 - Psest_2128 0.35 +0.6
Or see this region's nucleotide sequence