Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1842 and Psest_1843 are separated by 80 nucleotides Psest_1843 and Psest_1844 are separated by 52 nucleotides Psest_1844 and Psest_1845 are separated by 292 nucleotides
Psest_1842: Psest_1842 - Chemotaxis signal transduction protein, at 1,946,180 to 1,947,112
_1842
Psest_1843: Psest_1843 - Uncharacterized Fe-S protein, at 1,947,193 to 1,947,993
_1843
Psest_1844: Psest_1844 - Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), at 1,948,046 to 1,949,968
_1844
Psest_1845: Psest_1845 - ATPase components of ABC transporters with duplicated ATPase domains, at 1,950,261 to 1,952,162
_1845
Position (kb) 1948
1949
1950 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1947.139 kb on + strand at 1947.139 kb on + strand at 1947.140 kb on - strand at 1947.158 kb on + strand at 1947.158 kb on + strand at 1947.159 kb on - strand at 1947.159 kb on - strand at 1947.595 kb on + strand, within Psest_1843 at 1947.703 kb on - strand, within Psest_1843 at 1947.759 kb on + strand, within Psest_1843 at 1948.047 kb on + strand at 1948.113 kb on + strand at 1948.113 kb on + strand at 1948.113 kb on + strand at 1948.114 kb on - strand at 1948.114 kb on - strand at 1948.126 kb on - strand at 1948.248 kb on + strand, within Psest_1844 at 1948.248 kb on + strand, within Psest_1844 at 1948.248 kb on + strand, within Psest_1844 at 1948.248 kb on + strand, within Psest_1844 at 1948.248 kb on + strand, within Psest_1844 at 1948.248 kb on + strand, within Psest_1844 at 1948.248 kb on + strand, within Psest_1844 at 1948.249 kb on - strand, within Psest_1844 at 1948.249 kb on - strand, within Psest_1844 at 1948.249 kb on - strand, within Psest_1844 at 1948.291 kb on - strand, within Psest_1844 at 1948.306 kb on - strand, within Psest_1844 at 1948.306 kb on - strand, within Psest_1844 at 1948.592 kb on + strand, within Psest_1844 at 1948.592 kb on + strand, within Psest_1844 at 1948.592 kb on + strand, within Psest_1844 at 1948.593 kb on - strand, within Psest_1844 at 1948.593 kb on - strand, within Psest_1844 at 1948.614 kb on + strand, within Psest_1844 at 1948.614 kb on + strand, within Psest_1844 at 1948.614 kb on + strand, within Psest_1844 at 1948.614 kb on + strand, within Psest_1844 at 1948.614 kb on + strand, within Psest_1844 at 1948.615 kb on - strand, within Psest_1844 at 1948.615 kb on - strand, within Psest_1844 at 1948.615 kb on - strand, within Psest_1844 at 1948.615 kb on - strand, within Psest_1844 at 1948.615 kb on - strand, within Psest_1844 at 1948.629 kb on + strand, within Psest_1844 at 1948.629 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.881 kb on + strand, within Psest_1844 at 1949.076 kb on + strand, within Psest_1844 at 1949.077 kb on - strand, within Psest_1844 at 1949.077 kb on - strand, within Psest_1844 at 1949.077 kb on - strand, within Psest_1844 at 1949.077 kb on - strand, within Psest_1844 at 1949.077 kb on - strand, within Psest_1844 at 1949.087 kb on + strand, within Psest_1844 at 1949.087 kb on + strand, within Psest_1844 at 1949.395 kb on - strand, within Psest_1844 at 1949.568 kb on + strand, within Psest_1844 at 1949.568 kb on + strand, within Psest_1844 at 1949.616 kb on + strand, within Psest_1844 at 1949.616 kb on + strand, within Psest_1844 at 1949.617 kb on - strand, within Psest_1844 at 1949.619 kb on + strand, within Psest_1844 at 1949.773 kb on - strand, within Psest_1844 at 1949.781 kb on + strand at 1949.781 kb on + strand at 1949.782 kb on - strand at 1949.871 kb on + strand at 1949.872 kb on - strand at 1949.874 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.979 kb on + strand at 1949.979 kb on + strand at 1949.980 kb on - strand at 1950.057 kb on + strand at 1950.057 kb on + strand at 1950.058 kb on - strand at 1950.089 kb on + strand at 1950.129 kb on + strand at 1950.129 kb on + strand at 1950.129 kb on + strand at 1950.129 kb on + strand at 1950.130 kb on - strand at 1950.130 kb on - strand at 1950.130 kb on - strand at 1950.190 kb on + strand at 1950.222 kb on + strand at 1950.222 kb on + strand at 1950.229 kb on + strand at 1950.229 kb on + strand at 1950.256 kb on + strand at 1950.257 kb on - strand at 1950.257 kb on - strand at 1950.257 kb on - strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.287 kb on - strand at 1950.287 kb on - strand at 1950.287 kb on - strand at 1950.287 kb on - strand at 1950.707 kb on + strand, within Psest_1845 at 1950.707 kb on + strand, within Psest_1845 at 1950.707 kb on + strand, within Psest_1845 at 1950.745 kb on + strand, within Psest_1845 at 1950.746 kb on - strand, within Psest_1845 at 1950.785 kb on - strand, within Psest_1845 at 1950.963 kb on + strand, within Psest_1845
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 1,947,139 + +0.6 1,947,139 + +1.1 1,947,140 - +0.0 1,947,158 + +1.3 1,947,158 + +0.9 1,947,159 - -0.3 1,947,159 - +0.6 1,947,595 + Psest_1843 0.50 -0.5 1,947,703 - Psest_1843 0.64 -0.0 1,947,759 + Psest_1843 0.71 +0.3 1,948,047 + +0.4 1,948,113 + +0.0 1,948,113 + -1.0 1,948,113 + -0.1 1,948,114 - +0.3 1,948,114 - +2.0 1,948,126 - +0.8 1,948,248 + Psest_1844 0.11 +0.4 1,948,248 + Psest_1844 0.11 +0.6 1,948,248 + Psest_1844 0.11 -0.1 1,948,248 + Psest_1844 0.11 +0.2 1,948,248 + Psest_1844 0.11 -0.9 1,948,248 + Psest_1844 0.11 +0.1 1,948,248 + Psest_1844 0.11 +1.3 1,948,249 - Psest_1844 0.11 +1.4 1,948,249 - Psest_1844 0.11 +1.5 1,948,249 - Psest_1844 0.11 +1.3 1,948,291 - Psest_1844 0.13 +2.4 1,948,306 - Psest_1844 0.14 +1.4 1,948,306 - Psest_1844 0.14 +0.1 1,948,592 + Psest_1844 0.28 +1.3 1,948,592 + Psest_1844 0.28 +0.7 1,948,592 + Psest_1844 0.28 -0.4 1,948,593 - Psest_1844 0.28 +0.3 1,948,593 - Psest_1844 0.28 +0.7 1,948,614 + Psest_1844 0.30 +3.5 1,948,614 + Psest_1844 0.30 +0.2 1,948,614 + Psest_1844 0.30 -0.8 1,948,614 + Psest_1844 0.30 +0.5 1,948,614 + Psest_1844 0.30 +1.8 1,948,615 - Psest_1844 0.30 +1.7 1,948,615 - Psest_1844 0.30 +0.3 1,948,615 - Psest_1844 0.30 +0.4 1,948,615 - Psest_1844 0.30 +1.6 1,948,615 - Psest_1844 0.30 +1.0 1,948,629 + Psest_1844 0.30 +0.9 1,948,629 + Psest_1844 0.30 +0.6 1,948,815 + Psest_1844 0.40 +0.6 1,948,815 + Psest_1844 0.40 +1.2 1,948,815 + Psest_1844 0.40 +0.8 1,948,815 + Psest_1844 0.40 +1.5 1,948,815 + Psest_1844 0.40 -0.4 1,948,815 + Psest_1844 0.40 +0.7 1,948,815 + Psest_1844 0.40 +1.2 1,948,815 + Psest_1844 0.40 +0.4 1,948,815 + Psest_1844 0.40 +1.1 1,948,815 + Psest_1844 0.40 +0.6 1,948,815 + Psest_1844 0.40 +0.2 1,948,815 + Psest_1844 0.40 +1.1 1,948,815 + Psest_1844 0.40 +1.6 1,948,816 - Psest_1844 0.40 -0.2 1,948,816 - Psest_1844 0.40 +1.2 1,948,816 - Psest_1844 0.40 -0.3 1,948,816 - Psest_1844 0.40 +0.7 1,948,816 - Psest_1844 0.40 -1.9 1,948,816 - Psest_1844 0.40 -0.1 1,948,816 - Psest_1844 0.40 +1.1 1,948,816 - Psest_1844 0.40 -0.0 1,948,816 - Psest_1844 0.40 +0.1 1,948,816 - Psest_1844 0.40 +0.7 1,948,816 - Psest_1844 0.40 +0.3 1,948,881 + Psest_1844 0.43 +1.8 1,949,076 + Psest_1844 0.54 +0.6 1,949,077 - Psest_1844 0.54 -2.6 1,949,077 - Psest_1844 0.54 +0.5 1,949,077 - Psest_1844 0.54 -0.6 1,949,077 - Psest_1844 0.54 +0.7 1,949,077 - Psest_1844 0.54 +0.2 1,949,087 + Psest_1844 0.54 +1.7 1,949,087 + Psest_1844 0.54 +0.9 1,949,395 - Psest_1844 0.70 +0.8 1,949,568 + Psest_1844 0.79 +1.1 1,949,568 + Psest_1844 0.79 +1.0 1,949,616 + Psest_1844 0.82 +0.5 1,949,616 + Psest_1844 0.82 +0.3 1,949,617 - Psest_1844 0.82 +0.6 1,949,619 + Psest_1844 0.82 -0.7 1,949,773 - Psest_1844 0.90 +0.2 1,949,781 + +1.1 1,949,781 + +1.1 1,949,782 - +0.5 1,949,871 + +1.1 1,949,872 - +0.7 1,949,874 + +0.7 1,949,971 + +0.7 1,949,971 + +0.2 1,949,971 + +0.7 1,949,971 + +0.7 1,949,971 + -1.0 1,949,971 + +0.9 1,949,971 + +0.9 1,949,971 + +1.0 1,949,971 + +1.0 1,949,971 + +1.0 1,949,971 + +1.9 1,949,972 - -0.2 1,949,972 - -0.3 1,949,972 - +0.7 1,949,972 - -2.1 1,949,972 - +0.9 1,949,972 - -0.7 1,949,972 - -1.5 1,949,972 - +0.5 1,949,972 - -1.2 1,949,972 - -0.4 1,949,972 - +0.3 1,949,972 - -0.6 1,949,972 - +0.1 1,949,972 - +0.2 1,949,979 + -0.0 1,949,979 + +0.5 1,949,980 - -0.6 1,950,057 + +1.0 1,950,057 + +0.7 1,950,058 - +0.8 1,950,089 + +0.2 1,950,129 + +1.0 1,950,129 + +1.8 1,950,129 + +1.2 1,950,129 + -0.0 1,950,130 - -2.7 1,950,130 - -1.0 1,950,130 - -2.0 1,950,190 + +0.8 1,950,222 + +0.6 1,950,222 + +0.8 1,950,229 + +0.5 1,950,229 + +0.3 1,950,256 + +0.7 1,950,257 - -0.4 1,950,257 - +0.5 1,950,257 - +1.5 1,950,286 + -0.0 1,950,286 + -0.3 1,950,286 + -0.4 1,950,286 + +0.4 1,950,286 + +0.1 1,950,286 + -0.0 1,950,286 + +0.4 1,950,286 + +0.5 1,950,286 + +0.4 1,950,286 + +0.9 1,950,287 - +0.4 1,950,287 - -1.9 1,950,287 - +1.2 1,950,287 - -0.0 1,950,707 + Psest_1845 0.23 +0.6 1,950,707 + Psest_1845 0.23 +0.4 1,950,707 + Psest_1845 0.23 +0.4 1,950,745 + Psest_1845 0.25 +0.3 1,950,746 - Psest_1845 0.25 +0.3 1,950,785 - Psest_1845 0.28 +0.9 1,950,963 + Psest_1845 0.37 +1.5
Or see this region's nucleotide sequence