Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1725 and Psest_1726 are separated by 28 nucleotides Psest_1726 and Psest_1727 are separated by 166 nucleotides
Psest_1725: Psest_1725 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 1,830,984 to 1,832,675
_1725
Psest_1726: Psest_1726 - Chemotaxis protein histidine kinase and related kinases, at 1,832,704 to 1,833,054
_1726
Psest_1727: Psest_1727 - Flagellar hook-length control protein, at 1,833,221 to 1,834,462
_1727
Position (kb)
1832
1833
1834 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1831.810 kb on - strand, within Psest_1725 at 1831.810 kb on - strand, within Psest_1725 at 1831.816 kb on + strand, within Psest_1725 at 1831.817 kb on - strand, within Psest_1725 at 1831.817 kb on - strand, within Psest_1725 at 1831.817 kb on - strand, within Psest_1725 at 1831.936 kb on + strand, within Psest_1725 at 1831.936 kb on + strand, within Psest_1725 at 1831.936 kb on + strand, within Psest_1725 at 1831.937 kb on - strand, within Psest_1725 at 1831.937 kb on - strand, within Psest_1725 at 1831.937 kb on - strand, within Psest_1725 at 1831.937 kb on - strand, within Psest_1725 at 1832.100 kb on - strand, within Psest_1725 at 1832.301 kb on + strand, within Psest_1725 at 1832.301 kb on + strand, within Psest_1725 at 1832.301 kb on + strand, within Psest_1725 at 1832.322 kb on + strand, within Psest_1725 at 1832.323 kb on - strand, within Psest_1725 at 1832.323 kb on - strand, within Psest_1725 at 1832.323 kb on - strand, within Psest_1725 at 1832.323 kb on - strand, within Psest_1725 at 1832.397 kb on + strand, within Psest_1725 at 1832.400 kb on + strand, within Psest_1725 at 1832.400 kb on + strand, within Psest_1725 at 1832.400 kb on + strand, within Psest_1725 at 1832.400 kb on + strand, within Psest_1725 at 1832.400 kb on + strand, within Psest_1725 at 1832.401 kb on - strand, within Psest_1725 at 1832.401 kb on - strand, within Psest_1725 at 1832.401 kb on - strand, within Psest_1725 at 1832.401 kb on - strand, within Psest_1725 at 1832.401 kb on - strand, within Psest_1725 at 1832.401 kb on - strand, within Psest_1725 at 1832.442 kb on + strand, within Psest_1725 at 1832.442 kb on + strand, within Psest_1725 at 1832.442 kb on + strand, within Psest_1725 at 1832.442 kb on + strand, within Psest_1725 at 1832.443 kb on - strand, within Psest_1725 at 1832.673 kb on + strand at 1832.673 kb on + strand at 1833.079 kb on - strand at 1833.126 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 1,831,810 - Psest_1725 0.49 +2.9 1,831,810 - Psest_1725 0.49 +2.0 1,831,816 + Psest_1725 0.49 +3.0 1,831,817 - Psest_1725 0.49 +1.9 1,831,817 - Psest_1725 0.49 +2.3 1,831,817 - Psest_1725 0.49 +2.2 1,831,936 + Psest_1725 0.56 +2.7 1,831,936 + Psest_1725 0.56 +0.8 1,831,936 + Psest_1725 0.56 -1.6 1,831,937 - Psest_1725 0.56 +2.4 1,831,937 - Psest_1725 0.56 +2.3 1,831,937 - Psest_1725 0.56 +2.0 1,831,937 - Psest_1725 0.56 +2.1 1,832,100 - Psest_1725 0.66 +2.3 1,832,301 + Psest_1725 0.78 +2.4 1,832,301 + Psest_1725 0.78 +2.9 1,832,301 + Psest_1725 0.78 +2.4 1,832,322 + Psest_1725 0.79 +2.0 1,832,323 - Psest_1725 0.79 +2.4 1,832,323 - Psest_1725 0.79 +2.2 1,832,323 - Psest_1725 0.79 +2.0 1,832,323 - Psest_1725 0.79 +2.1 1,832,397 + Psest_1725 0.84 +2.5 1,832,400 + Psest_1725 0.84 +1.5 1,832,400 + Psest_1725 0.84 +2.0 1,832,400 + Psest_1725 0.84 +2.0 1,832,400 + Psest_1725 0.84 +3.4 1,832,400 + Psest_1725 0.84 +2.4 1,832,401 - Psest_1725 0.84 +2.2 1,832,401 - Psest_1725 0.84 +2.3 1,832,401 - Psest_1725 0.84 +2.7 1,832,401 - Psest_1725 0.84 +2.1 1,832,401 - Psest_1725 0.84 +1.9 1,832,401 - Psest_1725 0.84 +2.4 1,832,442 + Psest_1725 0.86 +2.6 1,832,442 + Psest_1725 0.86 +3.1 1,832,442 + Psest_1725 0.86 +2.3 1,832,442 + Psest_1725 0.86 +2.4 1,832,443 - Psest_1725 0.86 +2.1 1,832,673 + -0.0 1,832,673 + -0.6 1,833,079 - +1.3 1,833,126 + -0.6
Or see this region's nucleotide sequence