Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1717 and Psest_1718 are separated by 239 nucleotides Psest_1718 and Psest_1719 are separated by 13 nucleotides
Psest_1717: Psest_1717 - benzoate transporter, at 1,823,283 to 1,824,470
_1717
Psest_1718: Psest_1718 - flagellar hook-basal body complex protein FliE, at 1,824,710 to 1,825,039
_1718
Psest_1719: Psest_1719 - flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF), at 1,825,053 to 1,826,837
_1719
Position (kb)
1824
1825
1826 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1823.762 kb on + strand, within Psest_1717 at 1823.762 kb on + strand, within Psest_1717 at 1823.971 kb on + strand, within Psest_1717 at 1823.971 kb on + strand, within Psest_1717 at 1823.972 kb on - strand, within Psest_1717 at 1824.024 kb on + strand, within Psest_1717 at 1824.363 kb on + strand at 1824.364 kb on - strand at 1824.377 kb on + strand at 1824.378 kb on - strand at 1824.428 kb on + strand at 1824.480 kb on + strand at 1824.484 kb on + strand at 1824.484 kb on + strand at 1824.485 kb on - strand at 1824.485 kb on - strand at 1824.485 kb on - strand at 1824.487 kb on + strand at 1824.487 kb on + strand at 1824.488 kb on - strand at 1824.522 kb on + strand at 1824.522 kb on + strand at 1824.523 kb on - strand at 1824.616 kb on - strand at 1824.707 kb on + strand at 1824.888 kb on + strand, within Psest_1718 at 1824.987 kb on + strand, within Psest_1718 at 1824.987 kb on + strand, within Psest_1718 at 1824.988 kb on - strand, within Psest_1718 at 1824.988 kb on - strand, within Psest_1718 at 1824.988 kb on - strand, within Psest_1718 at 1824.988 kb on - strand, within Psest_1718 at 1824.991 kb on + strand, within Psest_1718 at 1824.992 kb on - strand, within Psest_1718 at 1824.992 kb on - strand, within Psest_1718 at 1824.992 kb on - strand, within Psest_1718 at 1825.149 kb on - strand at 1825.322 kb on + strand, within Psest_1719 at 1825.639 kb on - strand, within Psest_1719 at 1825.833 kb on + strand, within Psest_1719
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 1,823,762 + Psest_1717 0.40 -0.3 1,823,762 + Psest_1717 0.40 +0.0 1,823,971 + Psest_1717 0.58 -1.8 1,823,971 + Psest_1717 0.58 -3.0 1,823,972 - Psest_1717 0.58 -0.0 1,824,024 + Psest_1717 0.62 -1.5 1,824,363 + +0.1 1,824,364 - +0.4 1,824,377 + -1.4 1,824,378 - +0.0 1,824,428 + -0.0 1,824,480 + +0.4 1,824,484 + +0.2 1,824,484 + +1.1 1,824,485 - -0.3 1,824,485 - +0.5 1,824,485 - +0.8 1,824,487 + +0.7 1,824,487 + +0.2 1,824,488 - -0.1 1,824,522 + +0.5 1,824,522 + +1.5 1,824,523 - +0.2 1,824,616 - -1.3 1,824,707 + +1.5 1,824,888 + Psest_1718 0.54 -1.3 1,824,987 + Psest_1718 0.84 +1.5 1,824,987 + Psest_1718 0.84 -0.7 1,824,988 - Psest_1718 0.84 -1.5 1,824,988 - Psest_1718 0.84 +0.4 1,824,988 - Psest_1718 0.84 -4.3 1,824,988 - Psest_1718 0.84 -0.8 1,824,991 + Psest_1718 0.85 -1.3 1,824,992 - Psest_1718 0.85 -2.4 1,824,992 - Psest_1718 0.85 -1.0 1,824,992 - Psest_1718 0.85 -0.9 1,825,149 - -0.3 1,825,322 + Psest_1719 0.15 -1.2 1,825,639 - Psest_1719 0.33 +0.2 1,825,833 + Psest_1719 0.44 -1.0
Or see this region's nucleotide sequence