Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1284 and Psest_1285 are separated by 128 nucleotides Psest_1285 and Psest_1286 are separated by 126 nucleotides
Psest_1284: Psest_1284 - exodeoxyribonuclease VII, large subunit, at 1,388,247 to 1,389,623
_1284
Psest_1285: Psest_1285 - hypothetical protein, at 1,389,752 to 1,390,303
_1285
Psest_1286: Psest_1286 - inosine-5'-monophosphate dehydrogenase, at 1,390,430 to 1,391,899
_1286
Position (kb)
1389
1390
1391 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1389.033 kb on + strand, within Psest_1284 at 1389.322 kb on + strand, within Psest_1284 at 1389.323 kb on - strand, within Psest_1284 at 1389.463 kb on + strand, within Psest_1284 at 1389.463 kb on + strand, within Psest_1284 at 1389.463 kb on + strand, within Psest_1284 at 1389.463 kb on + strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.464 kb on - strand, within Psest_1284 at 1389.636 kb on - strand at 1389.636 kb on - strand at 1389.752 kb on - strand at 1389.760 kb on + strand at 1389.760 kb on + strand at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.004 kb on + strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand at 1390.005 kb on - strand, within Psest_1285 at 1390.005 kb on - strand, within Psest_1285 at 1390.006 kb on + strand, within Psest_1285 at 1390.007 kb on - strand, within Psest_1285 at 1390.335 kb on + strand at 1390.336 kb on - strand at 1390.351 kb on - strand at 1390.351 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 1,389,033 + Psest_1284 0.57 +0.5 1,389,322 + Psest_1284 0.78 -1.6 1,389,323 - Psest_1284 0.78 -0.4 1,389,463 + Psest_1284 0.88 -2.0 1,389,463 + Psest_1284 0.88 -0.8 1,389,463 + Psest_1284 0.88 +0.1 1,389,463 + Psest_1284 0.88 +0.1 1,389,464 - Psest_1284 0.88 +0.4 1,389,464 - Psest_1284 0.88 -0.2 1,389,464 - Psest_1284 0.88 +1.4 1,389,464 - Psest_1284 0.88 -0.6 1,389,464 - Psest_1284 0.88 -0.8 1,389,464 - Psest_1284 0.88 +0.0 1,389,464 - Psest_1284 0.88 -0.2 1,389,636 - +0.6 1,389,636 - +0.4 1,389,752 - -0.2 1,389,760 + -2.1 1,389,760 + -2.5 1,390,004 + Psest_1285 0.46 -1.3 1,390,004 + Psest_1285 0.46 -2.2 1,390,004 + Psest_1285 0.46 -1.4 1,390,004 + Psest_1285 0.46 -1.3 1,390,004 + Psest_1285 0.46 -0.2 1,390,004 + Psest_1285 0.46 -1.3 1,390,004 + Psest_1285 0.46 -0.0 1,390,004 + Psest_1285 0.46 -0.4 1,390,004 + Psest_1285 0.46 +1.1 1,390,004 + Psest_1285 0.46 -0.3 1,390,004 + Psest_1285 0.46 -1.6 1,390,005 - Psest_1285 0.46 -1.9 1,390,005 - Psest_1285 0.46 -2.4 1,390,005 - Psest_1285 0.46 -1.4 1,390,005 - Psest_1285 0.46 +1.9 1,390,005 - Psest_1285 0.46 -1.8 1,390,005 - Psest_1285 0.46 -1.2 1,390,005 - Psest_1285 0.46 +1.4 1,390,005 - Psest_1285 0.46 -0.8 1,390,005 - +0.4 1,390,005 - Psest_1285 0.46 -0.4 1,390,005 - Psest_1285 0.46 +1.4 1,390,006 + Psest_1285 0.46 -0.5 1,390,007 - Psest_1285 0.46 -2.8 1,390,335 + -2.0 1,390,336 - -1.2 1,390,351 - +0.4 1,390,351 - -0.4
Or see this region's nucleotide sequence