Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1198

Experiment: Fusidic 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.016 mg/ml
1,300,711	+		Psest_1196	0.80	+0.1
1,300,768	+		Psest_1196	0.84	-0.1
1,300,769	-		Psest_1196	0.84	+0.8
1,300,783	+		Psest_1196	0.85	+1.7
1,300,783	+		Psest_1196	0.85	+0.2
1,300,783	+		Psest_1196	0.85	-0.2
1,300,783	+		Psest_1196	0.85	+0.7
1,300,784	-		Psest_1196	0.85	+0.9
1,300,784	-		Psest_1196	0.85	+3.2
1,300,873	+				+1.0
1,300,874	-				+0.1
1,300,874	-				-0.4
1,300,874	-				-1.6
1,300,968	+				+0.8
1,300,968	+				+1.0
1,301,009	+				-1.4
1,301,010	-				-0.3
1,301,104	+		Psest_1197	0.11	-0.1
1,301,104	+		Psest_1197	0.11	-0.9
1,301,104	+		Psest_1197	0.11	+1.2
1,301,104	+		Psest_1197	0.11	+0.3
1,301,105	-		Psest_1197	0.11	+0.2
1,301,105	-		Psest_1197	0.11	+0.1
1,301,105	-		Psest_1197	0.11	+0.8
1,301,203	+		Psest_1197	0.30	-0.6
1,301,310	+		Psest_1197	0.51	+0.8
1,301,311	-		Psest_1197	0.51	+2.0
1,301,311	-		Psest_1197	0.51	-1.2
1,301,311	-		Psest_1197	0.51	+0.0
1,301,479	+		Psest_1197	0.84	+2.9
1,301,479	+		Psest_1197	0.84	-1.2
1,301,479	+		Psest_1197	0.84	-0.3
1,301,480	-		Psest_1197	0.84	-1.4
1,301,630	+				+0.2
1,301,820	-		Psest_1198	0.15	-2.4
1,301,820	-		Psest_1198	0.15	-1.4
1,301,878	-		Psest_1198	0.21	-1.3
1,301,878	-		Psest_1198	0.21	+0.9
1,301,878	-		Psest_1198	0.21	+0.2
1,302,348	+		Psest_1198	0.68	-1.2
1,302,348	+		Psest_1198	0.68	-0.4
1,302,348	+		Psest_1198	0.68	+0.4
1,302,349	-		Psest_1198	0.68	-0.6
1,302,349	-		Psest_1198	0.68	-0.6
1,302,349	-		Psest_1198	0.68	-0.6
1,302,349	-		Psest_1198	0.68	-0.6
1,302,349	-		Psest_1198	0.68	-1.2
1,302,349	-		Psest_1198	0.68	-0.1
1,302,460	-		Psest_1198	0.79	-0.7
1,302,636	+				-0.4
1,302,700	+				+0.8
1,302,700	+				+0.4
1,302,700	+				+1.6
1,302,701	-				-0.2
1,302,701	-				-0.1
1,302,701	-				-0.4
1,302,729	+				+0.1
1,302,729	+				-0.0
1,302,729	+				+1.4
1,302,729	+				+2.0
1,302,729	+				-0.2
1,302,729	+				-0.3
1,302,730	-				-0.7
1,302,894	+		Psest_1199	0.32	-0.4
1,302,895	-		Psest_1199	0.32	-2.1
1,302,895	-		Psest_1199	0.32	-2.6
1,302,895	-		Psest_1199	0.32	-1.9
1,302,895	-		Psest_1199	0.32	-1.3
1,303,107	+		Psest_1199	0.73	+0.8
1,303,170	+		Psest_1199	0.86	+0.9
1,303,170	+		Psest_1199	0.86	+0.4
1,303,170	+		Psest_1199	0.86	+0.9
1,303,443	-		Psest_1200	0.22	+2.0
1,303,469	+		Psest_1200	0.25	+0.4
1,303,470	-		Psest_1200	0.25	+2.0
1,303,541	+		Psest_1200	0.32	+0.0
1,303,541	+		Psest_1200	0.32	+0.3
1,303,607	+		Psest_1200	0.39	-0.4
1,303,607	+		Psest_1200	0.39	-0.6
1,303,608	-		Psest_1200	0.39	+3.6
1,303,608	-		Psest_1200	0.39	+1.4
1,303,623	-		Psest_1200	0.41	+1.4