Strain Fitness in Shewanella amazonensis SB2B around Sama_3575

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
4,210,082	-		Sama_3573	0.46	-0.2
4,210,088	+		Sama_3573	0.47	+1.8
4,210,089	-		Sama_3573	0.47	+0.5
4,210,208	-		Sama_3573	0.61	-0.7
4,210,255	+		Sama_3573	0.66	-0.5
4,210,261	+		Sama_3573	0.67	-0.2
4,210,262	-		Sama_3573	0.67	+0.7
4,210,279	+		Sama_3573	0.69	-0.3
4,210,280	-		Sama_3573	0.69	+0.6
4,210,280	-		Sama_3573	0.69	-0.5
4,210,298	+		Sama_3573	0.71	-1.1
4,210,298	+		Sama_3573	0.71	+0.2
4,210,299	-		Sama_3573	0.72	-0.6
4,210,373	+		Sama_3573	0.80	-0.3
4,210,374	-		Sama_3573	0.80	+1.3
4,210,388	+		Sama_3573	0.82	-0.5
4,210,388	+		Sama_3573	0.82	-1.1
4,210,388	+		Sama_3573	0.82	-1.1
4,210,388	+		Sama_3573	0.82	+0.1
4,210,389	-		Sama_3573	0.82	-0.2
4,210,581	+				-3.1
4,210,581	+				-2.9
4,210,582	-				-0.6
4,210,597	+		Sama_3574	0.12	-1.4
4,210,598	-		Sama_3574	0.12	-2.0
4,210,598	-		Sama_3574	0.12	-1.7
4,210,598	-		Sama_3574	0.12	-1.8
4,210,598	-		Sama_3574	0.12	-1.8
4,210,699	-		Sama_3574	0.40	-1.9
4,210,785	-		Sama_3574	0.63	-0.1
4,210,829	-		Sama_3574	0.74	-1.7
4,210,845	+		Sama_3574	0.79	-0.2
4,210,845	+		Sama_3574	0.79	-1.6
4,210,845	+		Sama_3574	0.79	-0.7
4,210,845	+		Sama_3574	0.79	-0.1
4,210,845	+		Sama_3574	0.79	-0.4
4,210,846	-		Sama_3574	0.79	+0.7
4,210,846	-		Sama_3574	0.79	-1.1
4,210,846	-		Sama_3574	0.79	+0.1
4,210,846	-		Sama_3574	0.79	-1.7
4,210,846	-		Sama_3574	0.79	-1.9
4,210,846	-		Sama_3574	0.79	-1.7
4,210,846	-		Sama_3574	0.79	-1.3
4,210,846	-		Sama_3574	0.79	-1.1
4,210,846	-		Sama_3574	0.79	+1.3
4,210,856	-		Sama_3574	0.82	-1.3
4,210,856	-		Sama_3574	0.82	-1.9
4,210,856	-		Sama_3574	0.82	-1.2
4,210,856	-		Sama_3574	0.82	-1.2
4,210,878	-		Sama_3574	0.88	-0.7
4,210,878	-		Sama_3574	0.88	-3.4
4,210,918	+				-2.9
4,210,918	+				-0.7
4,210,919	-				-0.8
4,210,919	-				+0.3
4,210,919	-				+0.3
4,210,919	-				-1.7
4,210,924	+				-1.5
4,210,924	+				+0.2
4,210,924	+				-0.2
4,210,925	-				-0.6
4,210,925	-				+1.3
4,210,925	-				+0.7
4,210,925	-				-1.6
4,210,967	+				-0.1
4,210,967	+				-3.2
4,210,968	-				-0.1
4,210,969	+				-0.2
4,210,969	+				+0.5
4,210,969	+				-0.4
4,210,970	-				+0.7
4,210,970	-				+0.2
4,210,970	-				-1.3
4,210,970	-				-1.6
4,210,970	-				+0.9
4,210,974	+				-1.6
4,210,974	+				-0.9
4,210,975	-				-0.6
4,211,005	+				-0.4
4,211,005	+				-0.7
4,211,005	+				-0.7
4,211,006	-				-1.1
4,211,006	-				+0.3
4,211,006	-				-0.0
4,211,012	+				+0.3
4,211,012	+				-1.8
4,211,012	+				-1.9
4,211,012	+				+0.9
4,211,012	+				-1.6
4,211,012	+				-1.2
4,211,012	+				+1.5
4,211,012	+				+0.8
4,211,013	-				+0.3
4,211,013	-				+0.0
4,211,013	-				-0.0
4,211,021	-				-2.2
4,211,021	-				-0.1
4,211,021	-				-1.3
4,211,021	-				-0.3
4,211,119	+				-0.8
4,211,119	+				-0.9
4,211,119	+				-0.8
4,211,119	+				+0.3
4,211,119	+				+0.4
4,211,120	-				+1.9
4,211,120	-				-2.2
4,211,120	-				-0.3
4,211,120	-				-0.3
4,211,120	-				-0.3
4,211,120	-				-1.8
4,211,120	-				-3.3
4,211,157	+				-0.8
4,211,158	-				-1.2
4,211,158	-				+0.2
4,211,170	+		Sama_3575	0.10	-0.6
4,211,170	+		Sama_3575	0.10	-0.4
4,211,171	-		Sama_3575	0.10	-1.0
4,211,239	+		Sama_3575	0.15	+0.6
4,211,239	+		Sama_3575	0.15	+0.7
4,211,239	+		Sama_3575	0.15	+0.3
4,211,239	+		Sama_3575	0.15	-0.1
4,211,239	+		Sama_3575	0.15	+0.2
4,211,240	-		Sama_3575	0.15	-1.3
4,211,240	-		Sama_3575	0.15	-1.8
4,211,243	+		Sama_3575	0.15	+0.1
4,211,243	+		Sama_3575	0.15	-0.6
4,211,244	-		Sama_3575	0.15	+1.3
4,211,244	-		Sama_3575	0.15	-1.6
4,211,244	-		Sama_3575	0.15	-0.2
4,211,250	+		Sama_3575	0.16	-0.2
4,211,250	+		Sama_3575	0.16	-1.1
4,211,250	+		Sama_3575	0.16	-1.4
4,211,250	+		Sama_3575	0.16	-2.0
4,211,251	-		Sama_3575	0.16	-0.1
4,211,352	-		Sama_3575	0.22	+0.1
4,211,352	-		Sama_3575	0.22	+0.6
4,211,352	-		Sama_3575	0.22	-0.3
4,211,352	-		Sama_3575	0.22	+0.9
4,211,352	-		Sama_3575	0.22	+0.7
4,211,389	+		Sama_3575	0.25	-2.5
4,211,389	+		Sama_3575	0.25	-0.8
4,211,389	+		Sama_3575	0.25	+1.9
4,211,389	+		Sama_3575	0.25	+0.1
4,211,389	+		Sama_3575	0.25	-1.7
4,211,389	+		Sama_3575	0.25	-1.5
4,211,389	+		Sama_3575	0.25	-0.7
4,211,389	+		Sama_3575	0.25	-2.1
4,211,389	+		Sama_3575	0.25	-1.0
4,211,389	+		Sama_3575	0.25	+0.3
4,211,390	-		Sama_3575	0.25	+1.1
4,211,390	-		Sama_3575	0.25	-1.2
4,211,390	-		Sama_3575	0.25	-0.4
4,211,390	-		Sama_3575	0.25	-0.3
4,211,390	-		Sama_3575	0.25	-0.1
4,211,390	-		Sama_3575	0.25	-0.2
4,211,390	-		Sama_3575	0.25	-0.4
4,211,390	-		Sama_3575	0.25	+1.0
4,211,532	-		Sama_3575	0.34	-1.8
4,211,542	-		Sama_3575	0.35	-0.9
4,211,578	+		Sama_3575	0.37	-0.7
4,211,596	-		Sama_3575	0.38	-0.4
4,211,614	-		Sama_3575	0.39	-1.1
4,211,614	-		Sama_3575	0.39	-0.3
4,211,614	-		Sama_3575	0.39	-0.2
4,211,614	-		Sama_3575	0.39	-0.9
4,211,625	+		Sama_3575	0.40	+0.2
4,211,625	+		Sama_3575	0.40	-2.1
4,211,625	+		Sama_3575	0.40	-0.5
4,211,625	+		Sama_3575	0.40	-0.9
4,211,625	+		Sama_3575	0.40	-1.6
4,211,625	+		Sama_3575	0.40	-0.4
4,211,625	+		Sama_3575	0.40	-0.7
4,211,625	+		Sama_3575	0.40	-2.1
4,211,625	+		Sama_3575	0.40	-0.9
4,211,626	-		Sama_3575	0.40	+0.5
4,211,626	-		Sama_3575	0.40	-1.4
4,211,626	-		Sama_3575	0.40	-1.1
4,211,630	+		Sama_3575	0.40	-0.4
4,211,649	+		Sama_3575	0.42	-0.4
4,211,649	+		Sama_3575	0.42	-1.1
4,211,649	+		Sama_3575	0.42	-2.6
4,211,650	-		Sama_3575	0.42	+1.1
4,211,650	-		Sama_3575	0.42	+0.2
4,211,650	-		Sama_3575	0.42	-0.5
4,211,650	-		Sama_3575	0.42	+0.1
4,211,650	-		Sama_3575	0.42	-1.7
4,211,650	-		Sama_3575	0.42	-0.1
4,211,650	-		Sama_3575	0.42	-1.8
4,211,698	+		Sama_3575	0.45	-1.9
4,211,698	+		Sama_3575	0.45	-0.2
4,211,698	+		Sama_3575	0.45	+1.7
4,211,699	-		Sama_3575	0.45	-2.0
4,211,699	-		Sama_3575	0.45	-0.5
4,211,699	-		Sama_3575	0.45	-1.1
4,211,783	+		Sama_3575	0.51	+0.7
4,211,921	+		Sama_3575	0.60	-1.9
4,211,921	+		Sama_3575	0.60	-0.9
4,211,922	-		Sama_3575	0.60	+0.6
4,211,922	-		Sama_3575	0.60	+1.1
4,211,936	-		Sama_3575	0.61	+0.9
4,211,952	+		Sama_3575	0.62	+1.0
4,211,987	+		Sama_3575	0.64	-0.4
4,211,987	+		Sama_3575	0.64	-2.0
4,211,988	-		Sama_3575	0.64	-0.8
4,211,988	-		Sama_3575	0.64	-0.8
4,212,012	+		Sama_3575	0.66	+0.4
4,212,012	+		Sama_3575	0.66	-0.3
4,212,012	+		Sama_3575	0.66	+0.9
4,212,012	+		Sama_3575	0.66	+0.4
4,212,013	-		Sama_3575	0.66	+0.1
4,212,013	-		Sama_3575	0.66	-0.8
4,212,013	-		Sama_3575	0.66	-0.6
4,212,013	-		Sama_3575	0.66	-1.1
4,212,013	-		Sama_3575	0.66	-1.8
4,212,013	-		Sama_3575	0.66	+0.6
4,212,013	-		Sama_3575	0.66	+0.5
4,212,013	-		Sama_3575	0.66	-0.7
4,212,013	-		Sama_3575	0.66	-1.6
4,212,013	-		Sama_3575	0.66	-0.9
4,212,033	+		Sama_3575	0.67	-0.3
4,212,033	+		Sama_3575	0.67	-0.1
4,212,062	-		Sama_3575	0.69	-0.4
4,212,077	+		Sama_3575	0.70	-0.4
4,212,077	+		Sama_3575	0.70	-1.3
4,212,077	+		Sama_3575	0.70	-0.3
4,212,077	+		Sama_3575	0.70	+0.5
4,212,077	+		Sama_3575	0.70	-2.0
4,212,078	-		Sama_3575	0.70	+1.3
4,212,078	-		Sama_3575	0.70	+0.7
4,212,078	-		Sama_3575	0.70	+0.5
4,212,078	-		Sama_3575	0.70	+0.1
4,212,078	-		Sama_3575	0.70	+1.6
4,212,078	-		Sama_3575	0.70	+0.4
4,212,078	-		Sama_3575	0.70	-1.0
4,212,078	-		Sama_3575	0.70	-0.2
4,212,147	+		Sama_3575	0.74	-0.8
4,212,147	+		Sama_3575	0.74	-1.5
4,212,147	+		Sama_3575	0.74	-2.0
4,212,147	+		Sama_3575	0.74	+1.6
4,212,147	+		Sama_3575	0.74	-0.9
4,212,147	+		Sama_3575	0.74	-0.9
4,212,147	+		Sama_3575	0.74	-0.0
4,212,147	+		Sama_3575	0.74	-1.0
4,212,147	+		Sama_3575	0.74	-0.2
4,212,148	-		Sama_3575	0.74	+0.1
4,212,148	-		Sama_3575	0.74	+0.0
4,212,148	-		Sama_3575	0.74	-0.6
4,212,148	-		Sama_3575	0.74	-0.5
4,212,148	-		Sama_3575	0.74	-0.5
4,212,151	-		Sama_3575	0.75	-0.0
4,212,151	-		Sama_3575	0.75	-1.5
4,212,203	-		Sama_3575	0.78	-0.1
4,212,235	+		Sama_3575	0.80	+0.1
4,212,236	-		Sama_3575	0.80	+1.0
4,212,236	-		Sama_3575	0.80	+2.2
4,212,236	-		Sama_3575	0.80	-0.5
4,212,239	+		Sama_3575	0.80	-0.2
4,212,239	+		Sama_3575	0.80	+0.8
4,212,239	+		Sama_3575	0.80	-1.1
4,212,239	+		Sama_3575	0.80	+0.1
4,212,239	+		Sama_3575	0.80	-0.8
4,212,240	-		Sama_3575	0.81	+0.5
4,212,351	+		Sama_3575	0.88	-0.6
4,212,352	-		Sama_3575	0.88	-0.6
4,212,474	+				-1.4
4,212,475	-				-0.2
4,212,475	-				-0.9
4,212,511	+				-0.6
4,212,534	+				-1.7
4,212,535	-				-0.1
4,212,546	-				-0.6
4,212,707	+		Sama_3576	0.23	-1.6
4,212,707	+		Sama_3576	0.23	-0.6
4,212,708	-		Sama_3576	0.23	-1.0
4,212,796	-		Sama_3576	0.35	-0.7
4,212,796	-		Sama_3576	0.35	-1.1
4,212,805	+		Sama_3576	0.36	-0.1
4,212,805	+		Sama_3576	0.36	-1.4
4,212,806	-		Sama_3576	0.36	-0.3
4,212,806	-		Sama_3576	0.36	-0.4
4,212,806	-		Sama_3576	0.36	-1.5
4,212,819	+		Sama_3576	0.38	+0.8
4,212,819	+		Sama_3576	0.38	+0.1
4,212,819	+		Sama_3576	0.38	-0.8
4,212,819	+		Sama_3576	0.38	-0.5
4,212,819	+		Sama_3576	0.38	-1.4
4,212,820	-		Sama_3576	0.38	-1.6
4,212,820	-		Sama_3576	0.38	+0.1
4,212,820	-		Sama_3576	0.38	+0.2
4,212,820	-		Sama_3576	0.38	-1.7
4,212,820	-		Sama_3576	0.38	+0.0
4,212,820	-		Sama_3576	0.38	+0.9
4,212,823	+		Sama_3576	0.39	-0.8
4,212,823	+		Sama_3576	0.39	-0.9
4,212,823	+		Sama_3576	0.39	+2.0
4,212,823	+		Sama_3576	0.39	-0.1
4,212,823	+		Sama_3576	0.39	-0.7
4,212,823	+		Sama_3576	0.39	-0.7
4,212,824	-		Sama_3576	0.39	+1.0
4,212,824	-		Sama_3576	0.39	-2.3
4,212,824	-		Sama_3576	0.39	-0.4
4,212,824	-		Sama_3576	0.39	-1.8
4,212,824	-		Sama_3576	0.39	-1.4
4,212,876	-		Sama_3576	0.46	+0.2
4,212,876	-		Sama_3576	0.46	-2.3
4,212,902	+		Sama_3576	0.49	-1.2
4,212,902	+		Sama_3576	0.49	+0.2
4,212,903	-		Sama_3576	0.49	-0.8
4,212,903	-		Sama_3576	0.49	+0.5
4,212,903	-		Sama_3576	0.49	-0.7
4,212,979	+		Sama_3576	0.60	-0.4
4,212,979	+		Sama_3576	0.60	-0.5
4,213,111	+		Sama_3576	0.78	-0.4
4,213,111	+		Sama_3576	0.78	-2.4
4,213,111	+		Sama_3576	0.78	-2.0
4,213,111	+		Sama_3576	0.78	-1.0
4,213,111	+		Sama_3576	0.78	+0.8
4,213,111	+		Sama_3576	0.78	-0.0
4,213,111	+		Sama_3576	0.78	-0.3
4,213,111	+		Sama_3576	0.78	-0.7
4,213,111	+		Sama_3576	0.78	-1.3
4,213,111	+		Sama_3576	0.78	+0.3
4,213,112	-		Sama_3576	0.78	-2.0
4,213,112	-		Sama_3576	0.78	-1.3
4,213,112	-		Sama_3576	0.78	-1.0
4,213,112	-		Sama_3576	0.78	-0.5
4,213,112	-		Sama_3576	0.78	+0.3
4,213,112	-		Sama_3576	0.78	-0.7
4,213,112	-		Sama_3576	0.78	-1.5
4,213,112	-		Sama_3576	0.78	-0.5
4,213,112	-		Sama_3576	0.78	-1.1
4,213,112	-		Sama_3576	0.78	+0.0
4,213,112	-		Sama_3576	0.78	-1.3
4,213,112	-		Sama_3576	0.78	-0.4
4,213,112	-		Sama_3576	0.78	-0.4
4,213,112	-		Sama_3576	0.78	-0.4
4,213,112	-		Sama_3576	0.78	-2.5
4,213,112	-		Sama_3576	0.78	-0.2
4,213,112	-		Sama_3576	0.78	-1.6
4,213,148	-		Sama_3576	0.83	+1.9
4,213,148	-		Sama_3576	0.83	-0.1
4,213,235	+				+0.7
4,213,236	-				-0.8
4,213,265	-				+0.4
4,213,265	-				+0.0
4,213,349	+				-0.8
4,213,349	+				+0.7
4,213,349	+				-0.4
4,213,349	+				-0.7
4,213,349	+				-1.6
4,213,350	-				-0.4
4,213,350	-				-2.3
4,213,350	-				-0.0
4,213,352	+				+0.1
4,213,352	+				-0.4
4,213,352	+				-0.4
4,213,352	+				-0.3
4,213,352	+				-0.9
4,213,353	-				-2.0
4,213,353	-				-1.4
4,213,353	-				+0.1
4,213,353	-				+0.3
4,213,353	-				-0.5
4,213,353	-				-1.2
4,213,353	-				-1.3
4,213,353	-				-2.8
4,213,359	+				-1.3
4,213,360	-				-0.9
4,213,360	-				-1.8
4,213,372	+				+0.2
4,213,372	+				-2.4
4,213,372	+				-1.4
4,213,372	+				-0.7
4,213,372	+				-2.4
4,213,372	+				-0.7
4,213,372	+				+0.3
4,213,372	+				-1.4
4,213,372	+				+1.3
4,213,372	+				-0.9
4,213,372	+				-1.6
4,213,372	+				-1.5
4,213,372	+				-0.6
4,213,372	+				-1.5
4,213,372	+				+0.2
4,213,373	-				-1.0
4,213,373	-				+0.9
4,213,373	-				-0.9
4,213,373	-				+1.0
4,213,373	-				-0.1
4,213,373	-				+0.4
4,213,373	-				-0.7
4,213,373	-				-0.1
4,213,373	-				-0.8
4,213,373	-				-0.9
4,213,373	-				-0.0
4,213,373	-				+0.9
4,213,373	-				-1.1
4,213,373	-				+0.4
4,213,373	-				+0.4
4,213,390	+		Sama_3577	0.10	+0.5
4,213,403	-		Sama_3577	0.12	-1.3
4,213,475	+		Sama_3577	0.18	+1.4
4,213,475	+		Sama_3577	0.18	-1.1
4,213,475	+		Sama_3577	0.18	-2.2
4,213,475	+		Sama_3577	0.18	-1.1
4,213,475	+		Sama_3577	0.18	+0.0
4,213,475	+		Sama_3577	0.18	+1.0
4,213,475	+		Sama_3577	0.18	+0.3
4,213,475	+		Sama_3577	0.18	+0.0
4,213,476	-		Sama_3577	0.18	-0.7
4,213,476	-		Sama_3577	0.18	-2.8
4,213,476	-		Sama_3577	0.18	+0.5
4,213,476	-		Sama_3577	0.18	+0.3
4,213,476	-		Sama_3577	0.18	-2.1
4,213,476	-		Sama_3577	0.18	-1.5
4,213,530	+		Sama_3577	0.23	-0.9
4,213,530	+		Sama_3577	0.23	+0.5
4,213,531	-		Sama_3577	0.23	+1.4
4,213,531	-		Sama_3577	0.23	-1.1
4,213,531	-		Sama_3577	0.23	+0.9