Strain Fitness in Shewanella amazonensis SB2B around Sama_3468

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
4,096,793	+		Sama_3466	0.74	-0.5
4,096,794	-		Sama_3466	0.74	+0.0
4,096,857	+		Sama_3466	0.81	+0.3
4,096,928	+		Sama_3466	0.88	-1.1
4,096,956	-				+0.1
4,097,053	+				+0.0
4,097,054	-				-1.7
4,097,054	-				+0.3
4,097,054	-				+1.5
4,097,054	-				+0.3
4,097,054	-				+1.2
4,097,055	+				+0.2
4,097,055	+				+0.4
4,097,055	+				+1.7
4,097,055	+				-0.1
4,097,055	+				-1.0
4,097,056	-				+0.4
4,097,056	-				-0.6
4,097,056	-				-0.3
4,097,056	-				-0.4
4,097,056	-				+0.3
4,097,056	-				+0.3
4,097,056	-				+0.3
4,097,056	-				+0.2
4,097,129	-		Sama_3467	0.11	-1.1
4,097,142	+		Sama_3467	0.13	-0.3
4,097,162	+		Sama_3467	0.16	-0.4
4,097,163	-		Sama_3467	0.16	+1.5
4,097,192	+		Sama_3467	0.20	+1.9
4,097,193	-		Sama_3467	0.20	-0.5
4,097,193	-		Sama_3467	0.20	-0.8
4,097,206	-		Sama_3467	0.22	-1.8
4,097,287	-		Sama_3467	0.34	-3.2
4,097,360	-		Sama_3467	0.45	+1.6
4,097,372	+		Sama_3467	0.46	+0.3
4,097,424	+		Sama_3467	0.54	-0.1
4,097,424	+		Sama_3467	0.54	+1.9
4,097,424	+		Sama_3467	0.54	-2.0
4,097,424	+		Sama_3467	0.54	+0.2
4,097,424	+		Sama_3467	0.54	-0.1
4,097,425	-		Sama_3467	0.54	-0.1
4,097,425	-		Sama_3467	0.54	-1.0
4,097,515	+		Sama_3467	0.67	+1.0
4,097,516	-		Sama_3467	0.67	+0.1
4,097,516	-		Sama_3467	0.67	-0.7
4,097,561	+		Sama_3467	0.74	-0.9
4,097,598	-		Sama_3467	0.79	+1.5
4,097,711	-				+1.0
4,097,711	-				-1.1
4,099,413	-				+0.3
4,099,450	-				+0.5
4,099,450	-				-0.4
4,099,462	-				-1.0
4,099,469	-				+0.9
4,099,469	-				+0.9
4,099,469	-				+0.7
4,099,507	-				+0.3
4,099,802	+		Sama_3469	0.41	-1.2
4,099,803	-		Sama_3469	0.41	-1.2
4,100,048	+		Sama_3469	0.80	-0.5
4,100,048	+		Sama_3469	0.80	-2.7
4,100,048	+		Sama_3469	0.80	-0.1
4,100,049	-		Sama_3469	0.80	-2.9
4,100,107	+		Sama_3469	0.89	-1.5
4,100,107	+		Sama_3469	0.89	+0.9
4,100,108	-		Sama_3469	0.90	-2.1
4,100,108	-		Sama_3469	0.90	-1.3
4,100,108	-		Sama_3469	0.90	-0.4
4,100,108	-		Sama_3469	0.90	-2.1
4,100,136	-				-2.7
4,100,136	-				-1.4
4,100,142	+				-0.8
4,100,142	+				+0.2
4,100,143	-				-1.1
4,100,143	-				-0.3
4,100,171	+				-1.1
4,100,171	+				-0.3
4,100,172	-				-2.9
4,100,233	+		Sama_3470	0.20	-0.5
4,100,233	+		Sama_3470	0.20	-0.6
4,100,234	-		Sama_3470	0.21	+0.0
4,100,234	-		Sama_3470	0.21	+1.9
4,100,264	+		Sama_3470	0.31	+0.3
4,100,264	+		Sama_3470	0.31	-0.1
4,100,264	+		Sama_3470	0.31	+0.4
4,100,264	+		Sama_3470	0.31	-1.6
4,100,264	+		Sama_3470	0.31	-1.8
4,100,264	+		Sama_3470	0.31	-2.2
4,100,264	+		Sama_3470	0.31	-0.7
4,100,264	+		Sama_3470	0.31	-0.7
4,100,264	+		Sama_3470	0.31	+0.3
4,100,264	+		Sama_3470	0.31	+0.2
4,100,264	+		Sama_3470	0.31	+1.4
4,100,264	+		Sama_3470	0.31	-0.2
4,100,264	+		Sama_3470	0.31	-0.1
4,100,264	+		Sama_3470	0.31	+0.5
4,100,264	+		Sama_3470	0.31	-1.6
4,100,264	+		Sama_3470	0.31	+0.6
4,100,264	+		Sama_3470	0.31	+0.9
4,100,264	+		Sama_3470	0.31	+0.2
4,100,264	+		Sama_3470	0.31	+2.5
4,100,264	+		Sama_3470	0.31	+0.4
4,100,264	+		Sama_3470	0.31	+0.5
4,100,264	+		Sama_3470	0.31	+0.5
4,100,264	+		Sama_3470	0.31	+2.1
4,100,264	+		Sama_3470	0.31	-1.4
4,100,264	+		Sama_3470	0.31	+0.9
4,100,264	+		Sama_3470	0.31	+1.2
4,100,264	+		Sama_3470	0.31	+0.4
4,100,265	-		Sama_3470	0.31	+1.1
4,100,265	-		Sama_3470	0.31	+0.3
4,100,265	-		Sama_3470	0.31	+2.7
4,100,265	-		Sama_3470	0.31	-0.8
4,100,265	-		Sama_3470	0.31	-1.5
4,100,265	-		Sama_3470	0.31	-0.4
4,100,265	-		Sama_3470	0.31	+1.0
4,100,265	-		Sama_3470	0.31	-0.6
4,100,265	-		Sama_3470	0.31	-1.3
4,100,265	-		Sama_3470	0.31	-0.7
4,100,265	-		Sama_3470	0.31	+0.3
4,100,265	-		Sama_3470	0.31	+0.3
4,100,265	-		Sama_3470	0.31	-0.1
4,100,265	-		Sama_3470	0.31	-1.0
4,100,265	-		Sama_3470	0.31	-0.5
4,100,265	-		Sama_3470	0.31	-1.1
4,100,265	-		Sama_3470	0.31	+0.3
4,100,265	-		Sama_3470	0.31	-2.0
4,100,265	-		Sama_3470	0.31	-0.6
4,100,265	-		Sama_3470	0.31	-1.5
4,100,265	-		Sama_3470	0.31	-0.4
4,100,265	-		Sama_3470	0.31	+0.2
4,100,265	-		Sama_3470	0.31	-0.3
4,100,265	-		Sama_3470	0.31	+0.9
4,100,265	-		Sama_3470	0.31	-0.6
4,100,265	-		Sama_3470	0.31	+1.3
4,100,265	-		Sama_3470	0.31	+1.0
4,100,265	-		Sama_3470	0.31	-0.5
4,100,265	-		Sama_3470	0.31	+2.3
4,100,265	-		Sama_3470	0.31	+1.0
4,100,265	-		Sama_3470	0.31	-0.5
4,100,265	-		Sama_3470	0.31	+1.3
4,100,265	-		Sama_3470	0.31	-1.2
4,100,265	-		Sama_3470	0.31	+0.0
4,100,265	-		Sama_3470	0.31	-0.7
4,100,265	-		Sama_3470	0.31	-2.2
4,100,265	-		Sama_3470	0.31	+1.1
4,100,265	-		Sama_3470	0.31	-0.1
4,100,265	-		Sama_3470	0.31	+0.3
4,100,265	-		Sama_3470	0.31	+0.5
4,100,265	-		Sama_3470	0.31	-1.1
4,100,265	-		Sama_3470	0.31	-1.7
4,100,265	-		Sama_3470	0.31	+0.1
4,100,268	+		Sama_3470	0.32	-0.4
4,100,268	+		Sama_3470	0.32	+1.8
4,100,273	+		Sama_3470	0.34	-0.1
4,100,274	-		Sama_3470	0.34	+0.4
4,100,336	+		Sama_3470	0.55	-0.2
4,100,337	-		Sama_3470	0.56	-0.5
4,100,337	-		Sama_3470	0.56	-0.3
4,100,374	+		Sama_3470	0.68	+0.6
4,100,375	-		Sama_3470	0.69	+0.2
4,100,399	+		Sama_3470	0.77	+1.2
4,100,399	+		Sama_3470	0.77	+0.1
4,100,399	+		Sama_3470	0.77	-1.3
4,100,400	-		Sama_3470	0.77	-0.9
4,100,426	+		Sama_3470	0.86	+1.0
4,100,426	+		Sama_3470	0.86	-1.1