Strain Fitness in Shewanella amazonensis SB2B around Sama_3216

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
3,807,446	+		Sama_3215	0.39	-0.8
3,807,446	+		Sama_3215	0.39	+0.7
3,807,447	-		Sama_3215	0.39	-0.0
3,807,447	-		Sama_3215	0.39	-0.8
3,807,447	-		Sama_3215	0.39	-1.8
3,807,537	-		Sama_3215	0.46	-2.1
3,807,589	+		Sama_3215	0.50	-1.0
3,807,589	+		Sama_3215	0.50	+0.3
3,807,590	-		Sama_3215	0.50	-1.2
3,807,590	-		Sama_3215	0.50	-1.6
3,807,617	+		Sama_3215	0.52	-1.2
3,807,617	+		Sama_3215	0.52	+0.6
3,807,618	-		Sama_3215	0.52	-0.8
3,807,618	-		Sama_3215	0.52	-1.7
3,807,691	-		Sama_3215	0.58	-3.7
3,807,712	-		Sama_3215	0.60	-1.6
3,807,720	+		Sama_3215	0.60	-1.7
3,807,720	+		Sama_3215	0.60	-3.0
3,807,757	+		Sama_3215	0.63	-1.6
3,807,757	+		Sama_3215	0.63	-0.8
3,807,761	-		Sama_3215	0.63	-1.5
3,807,761	-		Sama_3215	0.63	-0.3
3,807,761	-		Sama_3215	0.63	-0.6
3,807,783	+		Sama_3215	0.65	-2.7
3,807,783	+		Sama_3215	0.65	-2.2
3,807,784	-		Sama_3215	0.65	-0.7
3,807,803	+		Sama_3215	0.66	-2.3
3,807,803	+		Sama_3215	0.66	-0.8
3,807,804	-		Sama_3215	0.67	-1.8
3,807,804	-		Sama_3215	0.67	-2.3
3,807,825	+		Sama_3215	0.68	-2.0
3,807,831	+		Sama_3215	0.69	-2.2
3,807,831	+		Sama_3215	0.69	-0.1
3,807,831	+		Sama_3215	0.69	+0.4
3,807,831	+		Sama_3215	0.69	-0.2
3,807,832	-		Sama_3215	0.69	-0.5
3,807,832	-		Sama_3215	0.69	-2.0
3,807,832	-		Sama_3215	0.69	+0.5
3,807,832	-		Sama_3215	0.69	-0.8
3,807,835	+		Sama_3215	0.69	-2.5
3,807,835	+		Sama_3215	0.69	+0.4
3,807,835	+		Sama_3215	0.69	-1.3
3,807,835	+		Sama_3215	0.69	-2.2
3,807,835	+		Sama_3215	0.69	-0.6
3,807,836	-		Sama_3215	0.69	+1.7
3,807,836	-		Sama_3215	0.69	-0.9
3,807,836	-		Sama_3215	0.69	-0.1
3,807,836	-		Sama_3215	0.69	-1.1
3,807,836	-		Sama_3215	0.69	-1.1
3,807,875	+		Sama_3215	0.72	-0.7
3,807,876	-		Sama_3215	0.72	-2.7
3,807,898	-		Sama_3215	0.74	-1.2
3,807,907	+		Sama_3215	0.74	-0.9
3,807,907	+		Sama_3215	0.74	-1.4
3,808,018	+		Sama_3215	0.83	-2.2
3,808,228	+				+0.2
3,808,229	-				+0.7
3,808,263	+				-1.4
3,808,263	+				-0.5
3,808,263	+				-0.9
3,808,264	-				-0.6
3,808,274	+				-1.1
3,808,274	+				-2.0
3,808,274	+				-1.0
3,808,275	-				-0.3
3,808,275	-				-1.3
3,808,275	-				+1.3
3,808,275	-				+0.7
3,808,275	-				-0.3
3,808,275	-				+0.3
3,808,275	-				-2.7
3,808,279	+				+0.2
3,808,280	-				+0.9
3,808,280	-				-0.3
3,808,310	-				+2.3
3,808,310	-				+0.3
3,808,310	-				-0.6
3,808,310	-				-0.7
3,808,310	-				+1.5
3,808,331	+				-0.8
3,808,331	+				-0.3
3,808,346	-				-0.7
3,808,347	+				-1.0
3,808,347	+				-1.6
3,808,347	+				+0.7
3,808,347	+				-1.1
3,808,347	+				-0.0
3,808,347	+				-0.8
3,808,347	+				+1.0
3,808,347	+				-1.3
3,808,347	+				+0.4
3,808,347	+				+0.3
3,808,347	+				+0.3
3,808,347	+				+0.2
3,808,348	-				+0.2
3,808,354	+				-0.1
3,808,354	+				+0.5
3,808,354	+				-0.4
3,808,354	+				-0.8
3,808,354	+				-1.3
3,808,354	+				-0.5
3,808,354	+				-2.0
3,808,354	+				+0.9
3,808,354	+				-1.0
3,808,355	-				-1.3
3,808,355	-				-1.6
3,808,447	-		Sama_3216	0.15	-1.4
3,808,447	-		Sama_3216	0.15	-0.3
3,808,447	-		Sama_3216	0.15	-0.6
3,808,534	-		Sama_3216	0.42	-1.3
3,808,534	-		Sama_3216	0.42	-1.3
3,808,553	-		Sama_3216	0.48	-1.4
3,808,622	-		Sama_3216	0.69	+0.5
3,808,663	+		Sama_3216	0.81	-0.3
3,808,721	+				+0.7
3,808,721	+				-1.1
3,808,765	-				+0.0
3,808,808	+				-1.8
3,808,808	+				-1.1
3,808,808	+				-1.2
3,808,820	+				-1.3
3,808,820	+				-0.7
3,808,820	+				-1.7
3,808,820	+				-1.6
3,808,820	+				-1.8
3,808,835	+				-1.3
3,808,842	+				-1.1
3,808,874	+				-0.3