Strain Fitness in Shewanella amazonensis SB2B around Sama_3210

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
3,798,105	+		Sama_3208	0.68	+0.7
3,798,105	+		Sama_3208	0.68	+0.6
3,798,106	-		Sama_3208	0.68	-0.3
3,798,106	-		Sama_3208	0.68	+0.5
3,798,106	-		Sama_3208	0.68	-0.8
3,798,106	-		Sama_3208	0.68	+0.7
3,798,107	+		Sama_3208	0.68	-0.6
3,798,107	+		Sama_3208	0.68	+0.2
3,798,107	+		Sama_3208	0.68	-1.5
3,798,107	+		Sama_3208	0.68	-0.1
3,798,107	+		Sama_3208	0.68	+0.2
3,798,108	-		Sama_3208	0.68	-1.2
3,798,108	-		Sama_3208	0.68	+1.6
3,798,121	+		Sama_3208	0.71	-0.8
3,798,121	+		Sama_3208	0.71	-2.9
3,798,121	+		Sama_3208	0.71	-2.4
3,798,121	+		Sama_3208	0.71	+0.4
3,798,122	-		Sama_3208	0.71	+0.3
3,798,122	-		Sama_3208	0.71	-0.5
3,798,122	-		Sama_3208	0.71	+0.6
3,798,128	+		Sama_3208	0.72	-0.1
3,798,129	-		Sama_3208	0.72	+1.7
3,798,129	-		Sama_3208	0.72	-0.7
3,798,195	+		Sama_3208	0.84	+0.3
3,798,195	+		Sama_3208	0.84	-0.8
3,798,195	+		Sama_3208	0.84	-0.6
3,798,195	+		Sama_3208	0.84	+0.7
3,798,195	+		Sama_3208	0.84	-0.5
3,798,195	+		Sama_3208	0.84	-1.6
3,798,195	+		Sama_3208	0.84	+0.4
3,798,196	-		Sama_3208	0.85	+0.5
3,798,196	-		Sama_3208	0.85	-0.0
3,798,196	-		Sama_3208	0.85	+0.9
3,798,196	-		Sama_3208	0.85	+1.3
3,798,196	-		Sama_3208	0.85	+0.2
3,798,225	+				-0.4
3,798,225	+				+0.3
3,798,226	-				+0.9
3,798,226	-				+1.4
3,798,226	-				-3.8
3,798,226	-				-0.3
3,798,248	+				-0.4
3,798,248	+				+0.2
3,798,248	+				-0.1
3,798,272	+				-2.5
3,798,272	+				+1.2
3,798,276	+				-1.3
3,798,277	-				-0.5
3,798,277	-				+0.2
3,798,277	-				-0.0
3,798,277	-				+1.1
3,798,277	-				-0.6
3,798,280	+				-1.0
3,798,280	+				+1.4
3,798,280	+				+1.2
3,798,281	-				+0.2
3,798,281	-				+0.6
3,798,281	-				-2.7
3,798,281	-				-0.1
3,798,281	-				+1.5
3,798,281	-				+2.2
3,798,288	+				-1.5
3,798,288	+				+0.8
3,798,293	+				-0.8
3,798,293	+				-0.3
3,798,293	+				+1.0
3,798,293	+				-0.1
3,798,293	+				+0.2
3,798,294	-				+0.1
3,798,294	-				+0.9
3,798,294	-				+0.4
3,798,301	+				-0.8
3,798,301	+				+0.9
3,798,301	+				-1.6
3,798,302	-				-0.3
3,798,302	-				+0.7
3,798,369	+				+0.5
3,798,413	-		Sama_3209	0.14	-0.6
3,798,479	+		Sama_3209	0.22	-0.6
3,798,479	+		Sama_3209	0.22	+1.3
3,798,480	-		Sama_3209	0.22	+0.2
3,798,480	-		Sama_3209	0.22	-1.7
3,798,571	-		Sama_3209	0.33	-0.0
3,798,571	-		Sama_3209	0.33	-1.4
3,798,599	+		Sama_3209	0.37	-1.6
3,798,599	+		Sama_3209	0.37	+0.9
3,798,600	-		Sama_3209	0.37	-1.0
3,798,600	-		Sama_3209	0.37	-0.5
3,798,602	-		Sama_3209	0.37	-2.3
3,798,602	-		Sama_3209	0.37	+0.5
3,798,803	+		Sama_3209	0.62	-2.2
3,798,803	+		Sama_3209	0.62	+0.9
3,798,807	+		Sama_3209	0.63	-0.3
3,798,807	+		Sama_3209	0.63	-0.5
3,798,807	+		Sama_3209	0.63	+2.0
3,798,807	+		Sama_3209	0.63	-0.1
3,798,807	+		Sama_3209	0.63	-2.0
3,798,807	+		Sama_3209	0.63	-0.3
3,798,807	+		Sama_3209	0.63	-1.7
3,798,807	+		Sama_3209	0.63	+1.1
3,798,807	+		Sama_3209	0.63	-1.8
3,798,807	+		Sama_3209	0.63	+0.1
3,798,808	-		Sama_3209	0.63	+1.7
3,798,808	-		Sama_3209	0.63	+1.3
3,798,808	-		Sama_3209	0.63	-0.4
3,798,808	-		Sama_3209	0.63	+1.7
3,798,808	-		Sama_3209	0.63	+0.9
3,798,808	-		Sama_3209	0.63	+0.4
3,798,808	-		Sama_3209	0.63	-1.3
3,798,808	-		Sama_3209	0.63	+1.1
3,798,808	-		Sama_3209	0.63	+0.5
3,798,829	+		Sama_3209	0.66	-0.9
3,798,829	+		Sama_3209	0.66	-0.7
3,798,833	-		Sama_3209	0.66	+1.6
3,798,833	-		Sama_3209	0.66	+0.5
3,798,889	+		Sama_3209	0.73	-0.3
3,798,889	+		Sama_3209	0.73	-0.4
3,798,890	-		Sama_3209	0.73	+1.3
3,798,890	-		Sama_3209	0.73	+0.5
3,798,890	-		Sama_3209	0.73	+0.9
3,798,890	-		Sama_3209	0.73	+0.8
3,798,890	-		Sama_3209	0.73	+0.3
3,798,929	+		Sama_3209	0.78	-0.5
3,798,929	+		Sama_3209	0.78	-1.1
3,798,986	+		Sama_3209	0.85	-0.8
3,798,986	+		Sama_3209	0.85	+0.2
3,798,986	+		Sama_3209	0.85	-0.8
3,798,987	-		Sama_3209	0.85	+0.2
3,798,990	+		Sama_3209	0.86	-1.6
3,798,990	+		Sama_3209	0.86	-1.3
3,798,990	+		Sama_3209	0.86	+0.7
3,798,990	+		Sama_3209	0.86	+0.2
3,798,991	-		Sama_3209	0.86	+0.5
3,798,995	+		Sama_3209	0.86	-0.7
3,798,995	+		Sama_3209	0.86	+0.0
3,798,995	+		Sama_3209	0.86	+0.3
3,798,995	+		Sama_3209	0.86	+0.5
3,798,996	-		Sama_3209	0.86	+1.4
3,798,996	-		Sama_3209	0.86	+0.1
3,798,996	-		Sama_3209	0.86	-1.3
3,799,011	+		Sama_3209	0.88	+0.9
3,799,011	+		Sama_3209	0.88	-1.7
3,799,056	+				-0.6
3,799,056	+				-1.6
3,799,056	+				+0.6
3,799,057	-				-2.1
3,799,057	-				+0.5
3,799,057	-				+0.7
3,799,058	+				-1.7
3,799,058	+				-0.5
3,799,058	+				+0.1
3,799,059	-				-1.1
3,799,059	-				+0.6
3,799,103	+				+0.6
3,799,134	+				-1.1
3,799,134	+				-1.1
3,799,136	+				-0.7
3,799,136	+				+1.7
3,799,136	+				-0.8
3,799,136	+				-0.9
3,799,136	+				-0.4
3,799,136	+				-1.5
3,799,137	-				+0.6
3,799,137	-				+0.4
3,799,137	-				+0.4
3,799,137	-				-0.6
3,799,137	-				-0.4
3,799,137	-				+0.3
3,799,137	-				+0.9
3,799,171	+				+1.7
3,799,172	-				+0.5
3,799,172	-				+0.2
3,799,172	-				-1.3
3,799,173	+				+0.3
3,799,173	+				+0.6
3,799,173	+				-0.3
3,799,199	-				+0.1
3,799,199	-				-0.3
3,799,242	-				+1.0
3,799,342	+		Sama_3210	0.13	-0.3
3,799,343	-		Sama_3210	0.13	+1.8
3,799,343	-		Sama_3210	0.13	-1.3
3,799,343	-		Sama_3210	0.13	-0.2
3,799,346	+		Sama_3210	0.13	+0.1
3,799,346	+		Sama_3210	0.13	-2.0
3,799,346	+		Sama_3210	0.13	-0.1
3,799,346	+		Sama_3210	0.13	+0.7
3,799,346	+		Sama_3210	0.13	+0.5
3,799,346	+		Sama_3210	0.13	-0.7
3,799,346	+		Sama_3210	0.13	+0.0
3,799,346	+		Sama_3210	0.13	+0.3
3,799,346	+		Sama_3210	0.13	-0.6
3,799,346	+		Sama_3210	0.13	-0.4
3,799,346	+		Sama_3210	0.13	+0.6
3,799,347	-		Sama_3210	0.13	+0.0
3,799,347	-		Sama_3210	0.13	+1.0
3,799,347	-		Sama_3210	0.13	+0.9
3,799,347	-		Sama_3210	0.13	+1.5
3,799,347	-		Sama_3210	0.13	+1.0
3,799,347	-		Sama_3210	0.13	+0.9
3,799,347	-		Sama_3210	0.13	+0.5
3,799,347	-		Sama_3210	0.13	+0.7
3,799,347	-		Sama_3210	0.13	-0.3
3,799,347	-		Sama_3210	0.13	-0.7
3,799,347	-		Sama_3210	0.13	+1.3
3,799,347	-		Sama_3210	0.13	-0.1
3,799,347	-		Sama_3210	0.13	+1.0
3,799,347	-		Sama_3210	0.13	+0.2
3,799,347	-		Sama_3210	0.13	-0.4
3,799,347	-		Sama_3210	0.13	+0.9
3,799,347	-		Sama_3210	0.13	+2.4
3,799,347	-		Sama_3210	0.13	-1.1
3,799,347	-		Sama_3210	0.13	+1.0
3,799,385	+		Sama_3210	0.15	+0.2
3,799,385	+		Sama_3210	0.15	-0.7
3,799,386	-		Sama_3210	0.15	-0.5
3,799,386	-		Sama_3210	0.15	+1.3
3,799,391	+		Sama_3210	0.16	+1.2
3,799,406	+		Sama_3210	0.16	-0.8
3,799,419	+		Sama_3210	0.17	+0.3
3,799,419	+		Sama_3210	0.17	+0.7
3,799,419	+		Sama_3210	0.17	+0.0
3,799,420	-		Sama_3210	0.17	+1.3
3,799,420	-		Sama_3210	0.17	-1.1
3,799,500	-		Sama_3210	0.21	-0.7
3,799,574	+		Sama_3210	0.25	+0.2
3,799,574	+		Sama_3210	0.25	-0.2
3,799,575	-		Sama_3210	0.25	+0.2
3,799,637	+		Sama_3210	0.29	-2.0
3,799,638	-		Sama_3210	0.29	+0.9
3,799,693	+		Sama_3210	0.32	-1.1
3,799,694	-		Sama_3210	0.32	+0.5
3,799,725	+		Sama_3210	0.33	-0.0
3,799,725	+		Sama_3210	0.33	+1.2
3,799,725	+		Sama_3210	0.33	-0.6
3,799,725	+		Sama_3210	0.33	-1.7
3,799,726	-		Sama_3210	0.33	+0.2
3,799,726	-		Sama_3210	0.33	+0.8
3,799,731	+		Sama_3210	0.34	+0.0
3,799,731	+		Sama_3210	0.34	-0.9
3,799,731	+		Sama_3210	0.34	+1.0
3,799,731	+		Sama_3210	0.34	-1.3
3,799,732	-		Sama_3210	0.34	-1.6
3,799,732	-		Sama_3210	0.34	-2.5
3,799,732	-		Sama_3210	0.34	-0.1
3,799,732	-		Sama_3210	0.34	+0.2
3,799,732	-		Sama_3210	0.34	+0.2
3,799,732	-		Sama_3210	0.34	+0.6
3,799,732	-		Sama_3210	0.34	-0.7
3,799,732	-		Sama_3210	0.34	+1.2
3,799,732	-		Sama_3210	0.34	-0.3
3,799,732	-		Sama_3210	0.34	+0.7
3,799,732	-		Sama_3210	0.34	-0.4
3,799,732	-		Sama_3210	0.34	+0.4
3,799,732	-		Sama_3210	0.34	-0.3
3,799,734	+		Sama_3210	0.34	-0.7
3,799,734	+		Sama_3210	0.34	+0.4
3,799,735	-		Sama_3210	0.34	+0.1
3,799,743	+		Sama_3210	0.34	-1.4
3,799,743	+		Sama_3210	0.34	+1.6
3,799,743	+		Sama_3210	0.34	+0.3
3,799,743	+		Sama_3210	0.34	+0.5
3,799,743	+		Sama_3210	0.34	+0.3
3,799,743	+		Sama_3210	0.34	+1.7
3,799,744	-		Sama_3210	0.34	+0.3
3,799,744	-		Sama_3210	0.34	+0.7
3,799,744	-		Sama_3210	0.34	-1.2
3,799,744	-		Sama_3210	0.34	-0.8
3,799,744	-		Sama_3210	0.34	+0.4
3,799,744	-		Sama_3210	0.34	+0.0
3,799,813	+		Sama_3210	0.38	-0.5
3,799,813	+		Sama_3210	0.38	-0.6
3,799,814	-		Sama_3210	0.38	+0.5
3,799,814	-		Sama_3210	0.38	+0.8
3,799,814	-		Sama_3210	0.38	-0.5
3,799,814	-		Sama_3210	0.38	-1.1
3,799,892	-		Sama_3210	0.42	-0.5
3,799,901	+		Sama_3210	0.43	-0.4
3,799,901	+		Sama_3210	0.43	-0.1
3,799,901	+		Sama_3210	0.43	+0.3
3,799,902	-		Sama_3210	0.43	+0.6
3,799,902	-		Sama_3210	0.43	-1.3
3,799,902	-		Sama_3210	0.43	-1.3
3,799,906	-		Sama_3210	0.43	+1.2
3,799,914	-		Sama_3210	0.44	+0.6
3,799,914	-		Sama_3210	0.44	+1.0
3,799,919	+		Sama_3210	0.44	-1.7
3,799,920	-		Sama_3210	0.44	-0.9
3,799,920	-		Sama_3210	0.44	-0.3
3,799,920	-		Sama_3210	0.44	-1.6
3,799,920	-		Sama_3210	0.44	-0.8
3,799,920	-		Sama_3210	0.44	+0.3
3,799,982	+		Sama_3210	0.47	+1.3
3,799,982	+		Sama_3210	0.47	-1.3
3,799,982	+		Sama_3210	0.47	-0.9
3,799,982	+		Sama_3210	0.47	+0.4
3,799,982	+		Sama_3210	0.47	-0.8
3,799,983	-		Sama_3210	0.47	+0.7
3,799,989	+		Sama_3210	0.48	-2.0
3,799,990	-		Sama_3210	0.48	+0.3
3,799,990	-		Sama_3210	0.48	+0.9
3,800,004	+		Sama_3210	0.48	-0.1
3,800,004	+		Sama_3210	0.48	-0.6
3,800,004	+		Sama_3210	0.48	-1.3
3,800,004	+		Sama_3210	0.48	+0.6
3,800,004	+		Sama_3210	0.48	+0.6
3,800,004	+		Sama_3210	0.48	+0.7
3,800,004	+		Sama_3210	0.48	-0.6
3,800,004	+		Sama_3210	0.48	+0.2
3,800,005	-		Sama_3210	0.48	-1.7
3,800,005	-		Sama_3210	0.48	-1.3
3,800,005	-		Sama_3210	0.48	+0.7
3,800,005	-		Sama_3210	0.48	+0.7
3,800,005	-		Sama_3210	0.48	+0.7
3,800,005	-		Sama_3210	0.48	+0.9
3,800,030	+		Sama_3210	0.50	+2.7
3,800,041	+		Sama_3210	0.50	-1.1
3,800,042	-		Sama_3210	0.50	-1.0
3,800,097	+		Sama_3210	0.53	-2.2
3,800,114	-		Sama_3210	0.54	+0.0
3,800,114	-		Sama_3210	0.54	-0.5
3,800,132	+		Sama_3210	0.55	-0.8
3,800,151	+		Sama_3210	0.56	-1.4
3,800,152	-		Sama_3210	0.56	+0.0
3,800,237	-		Sama_3210	0.61	-0.0
3,800,251	-		Sama_3210	0.61	-0.3
3,800,251	-		Sama_3210	0.61	+2.0
3,800,281	+		Sama_3210	0.63	+0.7
3,800,281	+		Sama_3210	0.63	-0.1
3,800,281	+		Sama_3210	0.63	+0.7
3,800,282	-		Sama_3210	0.63	+0.7
3,800,282	-		Sama_3210	0.63	+0.7
3,800,282	-		Sama_3210	0.63	-2.2
3,800,282	-		Sama_3210	0.63	-0.8
3,800,312	+		Sama_3210	0.65	-1.8
3,800,312	+		Sama_3210	0.65	-1.3
3,800,313	-		Sama_3210	0.65	+0.4
3,800,501	+		Sama_3210	0.75	-1.4
3,800,502	-		Sama_3210	0.75	+0.3
3,800,527	+		Sama_3210	0.76	+1.1
3,800,527	+		Sama_3210	0.76	+0.4
3,800,572	+		Sama_3210	0.79	-0.4
3,800,572	+		Sama_3210	0.79	-0.8
3,800,572	+		Sama_3210	0.79	+0.5
3,800,572	+		Sama_3210	0.79	+1.2
3,800,573	-		Sama_3210	0.79	-1.4
3,800,573	-		Sama_3210	0.79	+1.0
3,800,573	-		Sama_3210	0.79	+0.1
3,800,589	-		Sama_3210	0.80	+1.4
3,800,601	+		Sama_3210	0.80	-0.6
3,800,601	+		Sama_3210	0.80	-1.6
3,800,601	+		Sama_3210	0.80	+0.7
3,800,602	-		Sama_3210	0.80	-0.0
3,800,622	+		Sama_3210	0.81	-1.4
3,800,622	+		Sama_3210	0.81	-1.4
3,800,622	+		Sama_3210	0.81	-0.2
3,800,623	-		Sama_3210	0.81	-1.0
3,800,623	-		Sama_3210	0.81	-0.7
3,800,623	-		Sama_3210	0.81	-1.0
3,800,623	-		Sama_3210	0.81	+2.5
3,800,623	-		Sama_3210	0.81	+0.2
3,800,623	-		Sama_3210	0.81	-0.1
3,800,623	-		Sama_3210	0.81	+0.2
3,800,711	+		Sama_3210	0.86	-0.0
3,800,711	+		Sama_3210	0.86	-1.8
3,800,711	+		Sama_3210	0.86	+1.5
3,800,712	-		Sama_3210	0.86	-1.8
3,800,716	+		Sama_3210	0.86	-1.3
3,800,716	+		Sama_3210	0.86	-0.8
3,800,716	+		Sama_3210	0.86	+0.2
3,800,716	+		Sama_3210	0.86	-0.4
3,800,716	+		Sama_3210	0.86	-0.5
3,800,717	-		Sama_3210	0.86	+0.6
3,800,717	-		Sama_3210	0.86	-0.4
3,800,717	-		Sama_3210	0.86	-0.3
3,800,777	-		Sama_3210	0.90	-1.7
3,800,807	+				-1.3
3,800,846	+				+0.3
3,800,847	-				-0.3
3,800,847	-				+1.0
3,800,847	-				+1.6
3,800,849	+				+0.2
3,800,849	+				-0.1
3,800,849	+				-0.1
3,800,904	+				+0.4
3,800,904	+				-0.5
3,800,904	+				+1.1
3,800,953	+				+0.9
3,800,953	+				+0.7
3,800,953	+				-0.3
3,800,953	+				+0.2
3,800,954	-				+0.3