Strain Fitness in Shewanella amazonensis SB2B around Sama_3150

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
3,737,234	+				-0.1
3,737,234	+				-0.3
3,737,235	-				-0.8
3,737,235	-				-0.2
3,737,235	-				-0.4
3,737,235	-				-0.8
3,737,263	+				-3.0
3,737,263	+				-1.1
3,737,263	+				-0.8
3,737,264	-				-1.6
3,737,264	-				-2.8
3,737,264	-				-0.8
3,737,265	+				-0.9
3,737,265	+				-1.3
3,737,265	+				-2.3
3,737,265	+				-2.3
3,737,265	+				-0.3
3,737,265	+				-0.0
3,737,266	-				-1.0
3,737,266	-				-0.4
3,737,266	-				+0.1
3,737,266	-				-0.9
3,737,266	-				-0.2
3,737,266	-				+1.0
3,737,266	-				+0.4
3,737,296	+				-1.0
3,737,310	+				-0.5
3,737,313	-				+0.1
3,737,413	+				-0.2
3,737,414	-				-1.8
3,737,414	-				-0.7
3,737,478	+				-1.1
3,737,479	-				+1.7
3,737,497	+				-0.5
3,737,497	+				-1.0
3,737,497	+				+1.1
3,737,497	+				-0.6
3,737,497	+				+0.2
3,737,497	+				+1.2
3,737,497	+				-0.5
3,737,497	+				+0.6
3,737,497	+				+0.5
3,737,498	-				-0.6
3,737,498	-				-0.7
3,737,498	-				+0.4
3,737,498	-				-0.2
3,737,498	-				-0.7
3,737,498	-				+0.2
3,737,498	-				-0.1
3,737,498	-				-0.4
3,737,498	-				+0.0
3,737,502	+				-1.4
3,737,517	+				-0.1
3,737,531	+		Sama_3149	0.11	-1.0
3,737,588	+		Sama_3149	0.18	-1.4
3,737,664	+		Sama_3149	0.28	-2.5
3,737,664	+		Sama_3149	0.28	-1.3
3,737,665	-		Sama_3149	0.28	-0.6
3,737,665	-		Sama_3149	0.28	-1.7
3,737,665	-		Sama_3149	0.28	-0.6
3,737,759	+		Sama_3149	0.41	+0.2
3,737,893	+		Sama_3149	0.58	-0.2
3,737,893	+		Sama_3149	0.58	-1.0
3,737,894	-		Sama_3149	0.58	-0.3
3,737,894	-		Sama_3149	0.58	+0.4
3,737,895	+		Sama_3149	0.58	+1.3
3,737,934	+		Sama_3149	0.63	+0.7
3,737,945	-		Sama_3149	0.65	+0.4
3,737,945	-		Sama_3149	0.65	-0.8
3,737,945	-		Sama_3149	0.65	-1.4
3,737,945	-		Sama_3149	0.65	-2.6
3,737,945	-		Sama_3149	0.65	-0.8
3,737,945	-		Sama_3149	0.65	+0.7
3,737,945	-		Sama_3149	0.65	-1.5
3,737,948	+		Sama_3149	0.65	-2.0
3,737,948	+		Sama_3149	0.65	+0.7
3,737,948	+		Sama_3149	0.65	+0.0
3,737,948	+		Sama_3149	0.65	-2.0
3,737,948	+		Sama_3149	0.65	-0.2
3,737,948	+		Sama_3149	0.65	-0.3
3,737,948	+		Sama_3149	0.65	-0.7
3,737,948	+		Sama_3149	0.65	-2.5
3,737,949	-		Sama_3149	0.65	+0.5
3,737,949	-		Sama_3149	0.65	-1.1
3,737,949	-		Sama_3149	0.65	-1.4
3,737,949	-		Sama_3149	0.65	-2.0
3,737,949	-		Sama_3149	0.65	-0.2
3,737,949	-		Sama_3149	0.65	+0.7
3,737,949	-		Sama_3149	0.65	-0.2
3,737,949	-		Sama_3149	0.65	-0.1
3,737,949	-		Sama_3149	0.65	-1.5
3,737,949	-		Sama_3149	0.65	-0.4
3,737,949	-		Sama_3149	0.65	-0.1
3,737,962	-		Sama_3149	0.67	+0.8
3,737,977	-		Sama_3149	0.69	-1.6
3,738,082	+		Sama_3149	0.82	+0.9
3,738,082	+		Sama_3149	0.82	-1.2
3,738,083	-		Sama_3149	0.83	-2.8
3,738,083	-		Sama_3149	0.83	-0.9
3,738,083	-		Sama_3149	0.83	-1.9
3,738,083	-		Sama_3149	0.83	-0.5
3,738,113	-		Sama_3149	0.87	-0.2
3,738,113	-		Sama_3149	0.87	-1.1
3,738,148	+				-0.3
3,738,148	+				+0.0
3,738,149	-				-0.1
3,738,149	-				-0.5
3,738,184	+				+0.4
3,738,184	+				-1.0
3,738,185	-				-1.1
3,738,214	+				+0.1
3,738,214	+				+0.6
3,738,214	+				-0.0
3,738,215	-				-0.8
3,738,245	+				+0.0
3,738,294	+				+0.5
3,738,294	+				+1.8
3,738,295	-				+0.3
3,738,295	-				-2.1
3,738,295	-				-1.6
3,738,295	-				-2.5
3,738,444	+		Sama_3150	0.33	-2.7
3,738,444	+		Sama_3150	0.33	-0.4
3,738,444	+		Sama_3150	0.33	-0.5
3,738,445	-		Sama_3150	0.33	-0.3
3,738,463	+		Sama_3150	0.36	+0.3
3,738,493	+		Sama_3150	0.41	-0.3
3,738,493	+		Sama_3150	0.41	+0.6
3,738,541	+		Sama_3150	0.49	-1.0
3,738,541	+		Sama_3150	0.49	-1.8
3,738,541	+		Sama_3150	0.49	+0.2
3,738,541	+		Sama_3150	0.49	-0.5
3,738,542	-		Sama_3150	0.49	-1.5
3,738,609	+		Sama_3150	0.59	-2.6
3,738,609	+		Sama_3150	0.59	+0.8
3,738,610	-		Sama_3150	0.60	-0.0
3,738,610	-		Sama_3150	0.60	+0.3
3,738,610	-		Sama_3150	0.60	+1.3
3,738,610	-		Sama_3150	0.60	+2.4
3,738,669	-		Sama_3150	0.69	+0.6
3,738,669	-		Sama_3150	0.69	-1.1
3,738,700	+		Sama_3150	0.74	+0.4
3,738,700	+		Sama_3150	0.74	+0.4
3,738,700	+		Sama_3150	0.74	-0.9
3,738,700	+		Sama_3150	0.74	-1.1
3,738,701	-		Sama_3150	0.74	+0.1
3,738,701	-		Sama_3150	0.74	+0.6
3,738,701	-		Sama_3150	0.74	-0.8
3,738,731	-		Sama_3150	0.79	+0.5
3,738,732	+		Sama_3150	0.79	-0.6
3,738,732	+		Sama_3150	0.79	+0.7
3,738,732	+		Sama_3150	0.79	-1.4
3,738,732	+		Sama_3150	0.79	-0.3
3,738,732	+		Sama_3150	0.79	+1.1
3,738,732	+		Sama_3150	0.79	-0.5
3,738,732	+		Sama_3150	0.79	+0.1
3,738,732	+		Sama_3150	0.79	-0.7
3,738,732	+		Sama_3150	0.79	+0.1
3,738,732	+		Sama_3150	0.79	-0.2
3,738,732	+		Sama_3150	0.79	-0.4
3,738,732	+		Sama_3150	0.79	+1.0
3,738,732	+		Sama_3150	0.79	-0.4
3,738,732	+		Sama_3150	0.79	-0.2
3,738,732	+		Sama_3150	0.79	+0.3
3,738,733	-		Sama_3150	0.79	-0.5
3,738,733	-		Sama_3150	0.79	+0.0
3,738,733	-		Sama_3150	0.79	-0.1
3,738,733	-		Sama_3150	0.79	-0.6
3,738,733	-		Sama_3150	0.79	+1.4
3,738,733	-		Sama_3150	0.79	+2.2
3,738,733	-		Sama_3150	0.79	+0.9
3,738,736	+		Sama_3150	0.79	-0.2
3,738,736	+		Sama_3150	0.79	-1.4
3,738,737	-		Sama_3150	0.80	-0.5
3,738,756	+		Sama_3150	0.83	+1.3
3,738,756	+		Sama_3150	0.83	+1.4
3,738,756	+		Sama_3150	0.83	-0.6
3,738,756	+		Sama_3150	0.83	+0.1
3,738,756	+		Sama_3150	0.83	+0.7
3,738,756	+		Sama_3150	0.83	-0.0
3,738,756	+		Sama_3150	0.83	+0.4
3,738,756	+		Sama_3150	0.83	+0.3
3,738,756	+		Sama_3150	0.83	+1.0
3,738,756	+		Sama_3150	0.83	+0.4
3,738,756	+		Sama_3150	0.83	-1.0
3,738,757	-		Sama_3150	0.83	-1.1
3,738,757	-		Sama_3150	0.83	-0.0
3,738,757	-		Sama_3150	0.83	-1.0
3,738,757	-		Sama_3150	0.83	+0.3
3,738,757	-		Sama_3150	0.83	-1.0
3,738,757	-		Sama_3150	0.83	+0.9
3,738,757	-		Sama_3150	0.83	+0.2
3,738,757	-		Sama_3150	0.83	-0.6
3,738,757	-		Sama_3150	0.83	+0.5
3,738,757	-		Sama_3150	0.83	-0.6
3,738,757	-		Sama_3150	0.83	-0.9
3,738,759	+		Sama_3150	0.83	+1.1
3,738,759	+		Sama_3150	0.83	+1.1
3,738,759	+		Sama_3150	0.83	+0.8
3,738,759	+		Sama_3150	0.83	+0.2
3,738,759	+		Sama_3150	0.83	+1.0
3,738,759	+		Sama_3150	0.83	-0.4
3,738,759	+		Sama_3150	0.83	-0.1
3,738,759	+		Sama_3150	0.83	+1.0
3,738,759	+		Sama_3150	0.83	-1.2
3,738,760	-		Sama_3150	0.83	-0.0
3,738,760	-		Sama_3150	0.83	+0.7
3,738,760	-		Sama_3150	0.83	-0.9
3,738,760	-		Sama_3150	0.83	+0.3
3,738,760	-		Sama_3150	0.83	+1.0
3,738,760	-		Sama_3150	0.83	+0.3
3,738,760	-		Sama_3150	0.83	-1.6
3,738,762	+		Sama_3150	0.84	+0.5
3,738,762	+		Sama_3150	0.84	-0.4
3,738,763	-		Sama_3150	0.84	+1.1
3,738,763	-		Sama_3150	0.84	+1.1
3,738,763	-		Sama_3150	0.84	-0.9
3,738,763	-		Sama_3150	0.84	-0.4
3,738,763	-		Sama_3150	0.84	+0.4
3,738,840	+				-2.2
3,738,841	-				+2.2
3,738,841	-				-1.5
3,738,841	-				-0.8
3,738,841	-				+0.4
3,738,842	+				-1.6
3,738,842	+				+0.8
3,738,842	+				+0.7
3,738,842	+				-0.2
3,738,842	+				-1.4
3,738,842	+				+0.5
3,738,842	+				+1.7
3,738,842	+				+0.1
3,738,842	+				-0.4
3,738,842	+				+0.6
3,738,843	-				+0.2
3,738,843	-				-0.2
3,738,843	-				+0.0
3,738,843	-				-0.4
3,738,843	-				+0.5
3,738,843	-				-1.9
3,738,843	-				+0.3
3,738,843	-				-3.6
3,738,843	-				+0.2
3,738,892	+				+0.4
3,738,894	+				-0.2
3,738,894	+				+0.2
3,738,895	-				-0.9
3,738,912	-				-0.4
3,738,953	+				-0.1
3,738,953	+				-1.0
3,738,953	+				-1.2
3,738,954	-				-1.0
3,738,954	-				+0.1
3,738,954	-				-1.5
3,738,954	-				-1.6
3,738,969	+				+0.2
3,738,970	-				-1.4
3,738,973	+				-1.5
3,738,973	+				+0.4
3,738,973	+				-0.3
3,738,973	+				-1.9
3,738,973	+				-0.7
3,738,973	+				-0.5
3,738,973	+				+1.7
3,738,973	+				-0.8
3,738,973	+				+1.1
3,738,973	+				-0.2
3,738,973	+				-0.6
3,738,973	+				+1.5
3,738,973	+				+1.4
3,738,973	+				-0.5
3,738,973	+				-0.2
3,738,973	+				+0.6
3,738,974	-				-1.2
3,738,974	-				+0.1
3,738,974	-				-1.5
3,738,974	-				-0.3
3,738,974	-				-3.0
3,738,974	-				-0.9
3,738,974	-				+2.4
3,738,974	-				-1.3
3,738,974	-				+0.6
3,738,974	-				-2.2
3,738,974	-				-0.1
3,738,974	-				+1.2
3,738,974	-				-1.0
3,738,975	+				-1.1
3,738,975	+				+0.5
3,738,975	+				-1.3
3,738,975	+				-0.6
3,738,975	+				+0.9
3,738,975	+				-1.2
3,738,975	+				-0.1
3,738,976	-				+0.3
3,738,976	-				-0.3
3,738,976	-				+0.7
3,738,986	+				+0.1
3,738,986	+				-0.2
3,738,987	-				-0.9
3,739,059	+				+0.1
3,739,059	+				-0.4
3,739,275	+		Sama_3151	0.32	+2.6
3,739,276	-		Sama_3151	0.32	+1.2
3,739,376	+		Sama_3151	0.43	+0.3
3,739,377	-		Sama_3151	0.43	-0.8
3,739,377	-		Sama_3151	0.43	-3.8
3,739,377	-		Sama_3151	0.43	-0.1
3,739,377	-		Sama_3151	0.43	+0.9
3,739,377	-		Sama_3151	0.43	-0.9
3,739,377	-		Sama_3151	0.43	-1.4
3,739,400	-		Sama_3151	0.46	-0.5
3,739,489	-		Sama_3151	0.55	+0.7
3,739,546	-		Sama_3151	0.62	-0.7
3,739,559	+		Sama_3151	0.63	-0.5
3,739,559	+		Sama_3151	0.63	-0.5
3,739,559	+		Sama_3151	0.63	-0.3
3,739,559	+		Sama_3151	0.63	-0.9
3,739,559	+		Sama_3151	0.63	-0.1
3,739,560	-		Sama_3151	0.63	-0.1
3,739,560	-		Sama_3151	0.63	-1.1
3,739,560	-		Sama_3151	0.63	-0.8
3,739,560	-		Sama_3151	0.63	-0.1
3,739,560	-		Sama_3151	0.63	-1.9
3,739,560	-		Sama_3151	0.63	-1.2
3,739,560	-		Sama_3151	0.63	+0.1
3,739,560	-		Sama_3151	0.63	-1.1
3,739,560	-		Sama_3151	0.63	+0.0
3,739,596	+		Sama_3151	0.67	-1.0
3,739,596	+		Sama_3151	0.67	-0.7
3,739,596	+		Sama_3151	0.67	-0.5
3,739,596	+		Sama_3151	0.67	-0.4
3,739,597	-		Sama_3151	0.67	-1.2
3,739,613	+		Sama_3151	0.69	-0.6
3,739,613	+		Sama_3151	0.69	+0.9
3,739,613	+		Sama_3151	0.69	+0.7
3,739,613	+		Sama_3151	0.69	-0.4
3,739,613	+		Sama_3151	0.69	-0.5
3,739,613	+		Sama_3151	0.69	+0.0
3,739,613	+		Sama_3151	0.69	-1.0
3,739,613	+		Sama_3151	0.69	+0.9
3,739,613	+		Sama_3151	0.69	+0.4
3,739,613	+		Sama_3151	0.69	-0.7
3,739,613	+		Sama_3151	0.69	-2.2
3,739,613	+		Sama_3151	0.69	+0.1
3,739,613	+		Sama_3151	0.69	-1.0
3,739,613	+		Sama_3151	0.69	-2.2
3,739,613	+		Sama_3151	0.69	+1.6
3,739,613	+		Sama_3151	0.69	-0.1
3,739,614	-		Sama_3151	0.69	+3.7
3,739,614	-		Sama_3151	0.69	+0.5
3,739,614	-		Sama_3151	0.69	+0.2
3,739,614	-		Sama_3151	0.69	-0.3
3,739,614	-		Sama_3151	0.69	-0.1
3,739,614	-		Sama_3151	0.69	-2.0
3,739,614	-		Sama_3151	0.69	+0.3
3,739,614	-		Sama_3151	0.69	+0.7
3,739,614	-		Sama_3151	0.69	-1.6
3,739,614	-		Sama_3151	0.69	-1.5
3,739,614	-		Sama_3151	0.69	-1.2
3,739,614	-		Sama_3151	0.69	+1.4
3,739,614	-		Sama_3151	0.69	-0.2
3,739,635	+		Sama_3151	0.71	+0.3
3,739,635	+		Sama_3151	0.71	-2.4
3,739,635	+		Sama_3151	0.71	-2.3
3,739,635	+		Sama_3151	0.71	-1.8
3,739,636	-		Sama_3151	0.71	-1.8
3,739,636	-		Sama_3151	0.71	+0.0
3,739,636	-		Sama_3151	0.71	-0.0
3,739,636	-		Sama_3151	0.71	-0.9
3,739,636	-		Sama_3151	0.71	-0.6
3,739,654	+		Sama_3151	0.73	+0.5
3,739,654	+		Sama_3151	0.73	-0.3
3,739,654	+		Sama_3151	0.73	-0.9
3,739,655	-		Sama_3151	0.73	+0.3
3,739,655	-		Sama_3151	0.73	+0.4
3,739,655	-		Sama_3151	0.73	-0.4
3,739,705	+		Sama_3151	0.79	-0.6
3,739,705	+		Sama_3151	0.79	-0.8
3,739,761	-		Sama_3151	0.85	-0.4
3,739,761	-		Sama_3151	0.85	+0.4
3,739,778	+		Sama_3151	0.87	-0.8
3,739,790	+		Sama_3151	0.88	-0.0
3,739,790	+		Sama_3151	0.88	-0.0
3,739,790	+		Sama_3151	0.88	+0.6
3,739,791	-		Sama_3151	0.88	+0.2
3,739,791	-		Sama_3151	0.88	-1.6
3,739,791	-		Sama_3151	0.88	+0.3
3,739,803	+		Sama_3151	0.90	+0.4
3,739,804	-		Sama_3151	0.90	+0.8
3,739,804	-		Sama_3151	0.90	-0.3
3,739,822	+				+0.0
3,739,822	+				-1.6