Strain Fitness in Shewanella amazonensis SB2B around Sama_2590

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
3,098,447	+				+0.1
3,098,447	+				-1.2
3,098,448	-		Sama_2590	0.10	+0.4
3,098,448	-		Sama_2590	0.10	-1.3
3,098,514	+		Sama_2590	0.17	-1.0
3,098,514	+		Sama_2590	0.17	-2.0
3,098,515	-		Sama_2590	0.17	-0.8
3,098,516	+		Sama_2590	0.17	-0.4
3,098,517	-		Sama_2590	0.17	+0.2
3,098,517	-		Sama_2590	0.17	-1.7
3,098,735	+		Sama_2590	0.39	+0.4
3,098,735	+		Sama_2590	0.39	-1.7
3,098,736	-		Sama_2590	0.39	-1.1
3,098,739	+		Sama_2590	0.39	+1.4
3,098,739	+		Sama_2590	0.39	+1.4
3,098,739	+		Sama_2590	0.39	-0.3
3,098,739	+		Sama_2590	0.39	-2.2
3,098,739	+		Sama_2590	0.39	+0.4
3,098,739	+		Sama_2590	0.39	-1.4
3,098,739	+		Sama_2590	0.39	-0.0
3,098,739	+		Sama_2590	0.39	-0.3
3,098,740	-		Sama_2590	0.39	-1.4
3,098,740	-		Sama_2590	0.39	-1.4
3,098,740	-		Sama_2590	0.39	-1.0
3,098,740	-		Sama_2590	0.39	+0.4
3,098,740	-		Sama_2590	0.39	-0.7
3,098,740	-		Sama_2590	0.39	-1.0
3,098,740	-		Sama_2590	0.39	+0.2
3,098,740	-		Sama_2590	0.39	-0.2
3,098,761	-		Sama_2590	0.42	-1.2
3,098,761	-		Sama_2590	0.42	-1.6
3,098,776	-		Sama_2590	0.43	-1.4
3,098,776	-		Sama_2590	0.43	-0.2
3,098,778	+		Sama_2590	0.43	+0.1
3,098,805	-		Sama_2590	0.46	-1.0
3,098,903	+		Sama_2590	0.56	-0.4
3,098,903	+		Sama_2590	0.56	+0.7
3,098,904	-		Sama_2590	0.56	+1.4
3,098,904	-		Sama_2590	0.56	-2.3
3,098,904	-		Sama_2590	0.56	-1.0
3,098,917	-		Sama_2590	0.57	-1.9
3,098,922	+		Sama_2590	0.58	+0.3
3,098,923	-		Sama_2590	0.58	-2.9
3,098,925	+		Sama_2590	0.58	-0.2
3,098,925	+		Sama_2590	0.58	-0.6
3,098,926	-		Sama_2590	0.58	-2.7
3,098,926	-		Sama_2590	0.58	-1.6
3,098,926	-		Sama_2590	0.58	-0.4
3,099,003	+		Sama_2590	0.66	+0.3
3,099,126	-		Sama_2590	0.78	+3.1
3,099,127	+		Sama_2590	0.79	-0.1
3,099,127	+		Sama_2590	0.79	+0.3
3,099,194	+		Sama_2590	0.85	+1.7
3,099,222	+		Sama_2590	0.88	+0.1
3,099,223	-		Sama_2590	0.88	-0.4
3,099,236	+		Sama_2590	0.90	-0.2
3,099,261	+				+0.3
3,099,261	+				-1.7
3,099,262	-				-0.4
3,099,263	+				-0.7
3,099,263	+				-0.8
3,099,263	+				+0.4
3,099,264	-				+0.7
3,099,280	-				+1.2
3,099,294	+				-0.0
3,099,314	+				-0.8
3,099,336	+				-1.5
3,099,546	+		Sama_2591	0.27	-1.2
3,099,565	+		Sama_2591	0.29	-2.3
3,099,877	+		Sama_2591	0.67	-1.6
3,099,904	+		Sama_2591	0.70	-3.0
3,099,904	+		Sama_2591	0.70	+2.0
3,099,906	+		Sama_2591	0.70	+1.0
3,099,906	+		Sama_2591	0.70	-0.7
3,099,932	-		Sama_2591	0.73	-0.7
3,100,022	+		Sama_2591	0.84	-1.0
3,100,078	-				-2.4
3,100,087	-				+0.4
3,100,129	+				-0.7
3,100,191	+				+0.1
3,100,191	+				+0.3
3,100,197	+				-1.5
3,100,225	+				-2.0