Strain Fitness in Shewanella amazonensis SB2B around Sama_2575

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
3,081,289	-				-0.8
3,081,321	+				+0.1
3,081,322	-				+0.3
3,081,339	-				-0.7
3,081,342	+				+0.2
3,081,342	+				-0.6
3,081,342	+				-0.4
3,081,342	+				+1.5
3,081,342	+				+0.4
3,081,343	-				+1.0
3,081,343	-				-2.7
3,081,362	+				-0.2
3,081,362	+				-0.1
3,081,362	+				-2.0
3,081,362	+				+1.8
3,081,363	-				+0.7
3,081,363	-				+0.2
3,081,363	-				-1.2
3,081,373	-				-1.7
3,081,373	-				+1.2
3,081,373	-				-0.1
3,081,433	+				+0.4
3,081,433	+				-0.2
3,081,433	+				-0.9
3,081,433	+				+0.3
3,081,434	-				-0.4
3,081,434	-				-0.3
3,081,434	-				-0.9
3,081,434	-				+0.4
3,081,496	+				+1.4
3,081,496	+				-0.4
3,081,496	+				+0.2
3,081,496	+				+0.4
3,081,497	-				+0.9
3,081,497	-				+0.2
3,081,497	-				-1.0
3,081,497	-				+0.0
3,081,497	-				-0.2
3,081,501	+				+0.4
3,081,501	+				+0.7
3,081,501	+				-0.9
3,081,501	+				+0.8
3,081,502	-				+0.7
3,081,512	+				-0.5
3,081,539	+		Sama_2574	0.12	+1.4
3,081,539	+		Sama_2574	0.12	-0.3
3,081,546	-		Sama_2574	0.15	+0.7
3,081,546	-		Sama_2574	0.15	+0.1
3,081,555	+		Sama_2574	0.18	-1.2
3,081,591	-		Sama_2574	0.30	-0.2
3,081,591	-		Sama_2574	0.30	-0.5
3,081,591	-		Sama_2574	0.30	+0.0
3,081,591	-		Sama_2574	0.30	+0.1
3,081,613	+		Sama_2574	0.37	+1.4
3,081,614	-		Sama_2574	0.37	+1.1
3,081,614	-		Sama_2574	0.37	-0.2
3,081,620	+		Sama_2574	0.39	-0.4
3,081,620	+		Sama_2574	0.39	+1.4
3,081,620	+		Sama_2574	0.39	+0.3
3,081,620	+		Sama_2574	0.39	-0.4
3,081,621	-		Sama_2574	0.40	+0.6
3,081,621	-		Sama_2574	0.40	-0.2
3,081,621	-		Sama_2574	0.40	+1.0
3,081,621	-		Sama_2574	0.40	-0.9
3,081,621	-		Sama_2574	0.40	-3.0
3,081,622	+		Sama_2574	0.40	-1.1
3,081,623	-		Sama_2574	0.40	-2.7
3,081,623	-		Sama_2574	0.40	-0.2
3,081,623	-		Sama_2574	0.40	+0.8
3,081,623	-		Sama_2574	0.40	-0.6
3,081,650	-		Sama_2574	0.49	-1.4
3,081,677	+		Sama_2574	0.58	-0.2
3,081,678	-		Sama_2574	0.59	-0.4
3,081,701	+		Sama_2574	0.66	-1.2
3,081,702	-		Sama_2574	0.67	+1.4
3,081,715	-		Sama_2574	0.71	+0.4
3,081,811	+				-0.6
3,081,826	+				-0.9
3,081,905	+				-1.3
3,081,981	+				-1.7
3,082,025	-				-0.2
3,082,061	-				-3.2
3,082,203	+		Sama_2575	0.17	-2.6
3,082,203	+		Sama_2575	0.17	-1.2
3,082,203	+		Sama_2575	0.17	-1.2
3,082,204	-		Sama_2575	0.18	-2.2
3,082,427	+		Sama_2575	0.33	-0.6
3,082,427	+		Sama_2575	0.33	-2.4
3,082,427	+		Sama_2575	0.33	-1.6
3,082,428	-		Sama_2575	0.33	-1.3
3,082,453	+		Sama_2575	0.35	-0.9
3,082,453	+		Sama_2575	0.35	-2.0
3,082,478	-		Sama_2575	0.36	-2.5
3,082,623	+		Sama_2575	0.46	-1.9
3,082,683	+		Sama_2575	0.51	-1.9
3,082,716	+		Sama_2575	0.53	-0.9
3,082,730	-		Sama_2575	0.54	-2.8
3,082,737	+		Sama_2575	0.54	-0.9
3,082,772	+		Sama_2575	0.57	-1.2
3,082,983	+		Sama_2575	0.71	-1.4
3,082,983	+		Sama_2575	0.71	-0.9
3,082,984	-		Sama_2575	0.71	+0.1
3,082,987	+		Sama_2575	0.71	-3.3
3,083,037	+		Sama_2575	0.75	-0.6
3,083,079	+		Sama_2575	0.78	-1.2
3,083,079	+		Sama_2575	0.78	-1.7
3,083,079	+		Sama_2575	0.78	-2.5
3,083,080	-		Sama_2575	0.78	-2.0
3,083,080	-		Sama_2575	0.78	-0.3
3,083,231	+		Sama_2575	0.88	-2.0
3,083,231	+		Sama_2575	0.88	-1.9
3,083,231	+		Sama_2575	0.88	-0.6
3,083,232	-		Sama_2575	0.88	-1.8
3,083,232	-		Sama_2575	0.88	-2.2
3,083,412	+				-0.6
3,083,412	+				-1.4
3,083,412	+				+0.1
3,083,412	+				-0.2
3,083,412	+				-1.0
3,083,412	+				+0.7
3,083,413	-				-2.4
3,083,413	-				-1.6
3,083,413	-				-1.4
3,083,444	+				+0.2
3,083,445	-				+1.1
3,083,487	+				-0.5
3,083,496	+				-0.6
3,083,496	+				-1.3
3,083,498	+				-1.7
3,083,498	+				-0.9
3,083,529	+				+0.2
3,083,782	+		Sama_2576	0.22	-1.0
3,084,230	+		Sama_2576	0.64	-0.9