Strain Fitness in Shewanella amazonensis SB2B around Sama_2504

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
3,008,218	-	carB	Sama_2503	0.71	-0.2
3,008,243	-	carB	Sama_2503	0.72	-0.2
3,008,272	-	carB	Sama_2503	0.73	-1.9
3,008,302	+	carB	Sama_2503	0.74	-1.4
3,008,302	+	carB	Sama_2503	0.74	-0.1
3,008,303	-	carB	Sama_2503	0.74	-1.1
3,008,303	-	carB	Sama_2503	0.74	-2.6
3,008,303	-	carB	Sama_2503	0.74	-1.4
3,008,303	-	carB	Sama_2503	0.74	-2.5
3,008,341	+	carB	Sama_2503	0.75	-1.8
3,008,342	-	carB	Sama_2503	0.75	-1.9
3,008,373	-	carB	Sama_2503	0.76	-2.9
3,008,425	-	carB	Sama_2503	0.77	-3.4
3,008,425	-	carB	Sama_2503	0.77	-2.1
3,008,425	-	carB	Sama_2503	0.77	-1.0
3,008,607	-	carB	Sama_2503	0.83	-1.4
3,008,607	-	carB	Sama_2503	0.83	-0.6
3,008,653	-	carB	Sama_2503	0.84	-1.7
3,008,656	-	carB	Sama_2503	0.85	-0.9
3,008,688	-	carB	Sama_2503	0.86	-2.7
3,008,688	-	carB	Sama_2503	0.86	-3.0
3,008,688	-	carB	Sama_2503	0.86	-2.9
3,008,917	-				-2.9
3,008,950	-				-2.1
3,008,960	+				-0.8
3,008,960	+				-0.2
3,008,960	+				-1.8
3,008,961	-				-0.6
3,008,961	-				-1.1
3,008,961	-				-3.2
3,008,961	-				-1.1
3,008,961	-				-1.2
3,008,961	-				+2.0
3,008,961	-				-0.8
3,009,029	+				-1.6
3,009,127	-				-2.9
3,009,133	+				-1.0
3,009,141	+				+2.4
3,009,142	-				-0.2
3,009,158	-				+0.4
3,009,161	-				-0.2
3,009,161	-				+0.1
3,009,180	-				+0.8
3,009,180	-				-0.7
3,009,198	-				+0.2
3,009,417	+		Sama_2504	0.21	-2.6
3,009,418	-		Sama_2504	0.21	-1.3
3,009,526	-		Sama_2504	0.30	-2.4
3,009,578	+		Sama_2504	0.35	-2.1
3,009,579	-		Sama_2504	0.35	+0.5
3,009,697	+		Sama_2504	0.45	-1.9
3,009,698	-		Sama_2504	0.45	-2.5
3,009,706	-		Sama_2504	0.46	-2.0
3,009,775	-		Sama_2504	0.52	-1.1
3,009,931	-		Sama_2504	0.66	-2.4
3,009,964	-		Sama_2504	0.69	-2.1
3,010,001	-		Sama_2504	0.72	-0.5
3,010,030	+		Sama_2504	0.74	-0.4
3,010,030	+		Sama_2504	0.74	-0.9
3,010,031	-		Sama_2504	0.74	-0.9
3,010,031	-		Sama_2504	0.74	-1.2
3,010,031	-		Sama_2504	0.74	-0.1
3,010,031	-		Sama_2504	0.74	-3.7
3,010,031	-		Sama_2504	0.74	-2.9
3,010,031	-		Sama_2504	0.74	-1.1
3,010,031	-		Sama_2504	0.74	-3.1
3,010,132	-		Sama_2504	0.83	-1.6
3,010,137	+		Sama_2504	0.84	-0.9
3,010,138	-		Sama_2504	0.84	-2.1
3,010,138	-		Sama_2504	0.84	-0.7
3,010,141	-		Sama_2504	0.84	-1.3
3,010,141	-		Sama_2504	0.84	-1.2
3,010,154	+		Sama_2504	0.85	-2.6
3,010,168	+		Sama_2504	0.86	-1.6
3,010,168	+		Sama_2504	0.86	-1.2
3,010,169	-		Sama_2504	0.86	-1.9
3,010,181	+		Sama_2504	0.88	-1.4
3,010,198	+		Sama_2504	0.89	+0.6
3,010,301	-				-1.2
3,010,486	+				-2.1
3,010,510	-				-1.6