Strain Fitness in Shewanella amazonensis SB2B around Sama_2465

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,970,904	+		Sama_2463	0.74	-0.4
2,970,904	+		Sama_2463	0.74	+1.4
2,970,904	+		Sama_2463	0.74	-1.4
2,970,904	+		Sama_2463	0.74	+0.9
2,970,904	+		Sama_2463	0.74	-2.1
2,970,904	+		Sama_2463	0.74	-0.6
2,970,904	+		Sama_2463	0.74	-0.3
2,970,905	-		Sama_2463	0.74	-1.6
2,970,905	-		Sama_2463	0.74	-1.0
2,970,905	-		Sama_2463	0.74	-0.3
2,970,905	-		Sama_2463	0.74	-1.0
2,970,905	-		Sama_2463	0.74	+0.6
2,970,905	-		Sama_2463	0.74	+0.3
2,970,905	-		Sama_2463	0.74	+0.4
2,970,905	-		Sama_2463	0.74	-2.3
2,970,921	+		Sama_2463	0.76	-1.4
2,970,922	-		Sama_2463	0.77	-1.7
2,970,998	+		Sama_2463	0.89	+1.4
2,970,998	+		Sama_2463	0.89	+0.3
2,970,998	+		Sama_2463	0.89	-0.5
2,970,998	+		Sama_2463	0.89	-0.6
2,970,998	+		Sama_2463	0.89	-0.1
2,970,999	-		Sama_2463	0.89	-0.5
2,970,999	-		Sama_2463	0.89	-0.4
2,970,999	-		Sama_2463	0.89	+0.8
2,970,999	-		Sama_2463	0.89	+0.4
2,970,999	-		Sama_2463	0.89	-1.6
2,970,999	-		Sama_2463	0.89	-0.8
2,971,037	+				-1.4
2,971,038	-				+1.1
2,971,038	-				-2.1
2,971,038	-				+0.7
2,971,042	-				-0.5
2,971,073	+				+2.1
2,971,073	+				-2.8
2,971,146	+				-1.2
2,971,147	-				-1.5
2,971,147	-				-2.6
2,971,186	-		Sama_2464	0.14	-2.2
2,971,186	-		Sama_2464	0.14	+1.8
2,971,186	-		Sama_2464	0.14	-1.8
2,971,190	+		Sama_2464	0.15	+0.1
2,971,191	-		Sama_2464	0.15	-1.2
2,971,219	+		Sama_2464	0.20	-1.6
2,971,220	-		Sama_2464	0.20	-2.2
2,971,220	-		Sama_2464	0.20	-2.5
2,971,223	-		Sama_2464	0.21	+0.4
2,971,223	-		Sama_2464	0.21	-2.7
2,971,248	-		Sama_2464	0.25	-1.0
2,971,248	-		Sama_2464	0.25	+0.6
2,971,248	-		Sama_2464	0.25	-0.4
2,971,248	-		Sama_2464	0.25	+0.3
2,971,471	+		Sama_2464	0.64	+0.4
2,971,472	-		Sama_2464	0.64	-1.1
2,971,500	-		Sama_2464	0.69	-0.3
2,971,500	-		Sama_2464	0.69	-0.8
2,971,600	+		Sama_2464	0.86	-0.9
2,971,662	-				+0.2
2,971,662	-				+0.4
2,971,748	+				+0.4
2,971,776	+				+0.8
2,971,806	-				+1.4
2,972,065	-		Sama_2465	0.33	-1.0
2,972,566	-				-1.8
2,972,597	+				-0.4
2,972,662	-				-0.2
2,972,662	-				-0.3
2,972,670	-				+0.6
2,972,698	-				-1.2
2,972,698	-				+0.0
2,972,698	-				+0.1
2,972,769	-		Sama_2466	0.21	+2.4
2,972,790	-		Sama_2466	0.25	-0.2
2,972,844	-		Sama_2466	0.35	+0.2
2,972,844	-		Sama_2466	0.35	-2.6
2,972,848	-		Sama_2466	0.35	+2.1
2,972,848	-		Sama_2466	0.35	+0.2
2,972,848	-		Sama_2466	0.35	-0.1
2,972,848	-		Sama_2466	0.35	+0.4
2,972,848	-		Sama_2466	0.35	+0.0
2,972,848	-		Sama_2466	0.35	-0.2
2,972,848	-		Sama_2466	0.35	-0.0
2,972,848	-		Sama_2466	0.35	-1.4
2,972,848	-		Sama_2466	0.35	-0.6
2,972,848	-		Sama_2466	0.35	+1.0
2,972,848	-		Sama_2466	0.35	-0.8
2,973,060	-		Sama_2466	0.73	-0.8
2,973,060	-		Sama_2466	0.73	-0.2
2,973,060	-		Sama_2466	0.73	-2.4
2,973,060	-		Sama_2466	0.73	-0.6
2,973,063	-		Sama_2466	0.73	-2.2
2,973,063	-		Sama_2466	0.73	-0.4
2,973,063	-		Sama_2466	0.73	+0.4
2,973,063	-		Sama_2466	0.73	+0.2
2,973,063	-		Sama_2466	0.73	+0.4
2,973,063	-		Sama_2466	0.73	-0.5
2,973,063	-		Sama_2466	0.73	+0.0
2,973,063	-		Sama_2466	0.73	+1.6
2,973,063	-		Sama_2466	0.73	-2.4
2,973,127	-		Sama_2466	0.85	+0.3
2,973,213	-				-0.0
2,973,292	-				-1.1
2,973,297	-				+0.4
2,973,304	-				-1.9
2,973,484	+		Sama_2467	0.23	-0.2
2,973,537	+		Sama_2467	0.33	-0.7
2,973,549	+		Sama_2467	0.35	+1.2
2,973,549	+		Sama_2467	0.35	+0.5
2,973,550	-		Sama_2467	0.36	-0.7
2,973,550	-		Sama_2467	0.36	+0.8
2,973,550	-		Sama_2467	0.36	-0.3
2,973,550	-		Sama_2467	0.36	-0.6
2,973,550	-		Sama_2467	0.36	-0.3
2,973,601	+		Sama_2467	0.46	-1.0
2,973,601	+		Sama_2467	0.46	+0.5
2,973,602	-		Sama_2467	0.46	+1.2