Strain Fitness in Shewanella amazonensis SB2B around Sama_2447

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,944,212	-		Sama_2446	0.26	+7.0
2,944,254	+		Sama_2446	0.30	-2.2
2,944,255	-		Sama_2446	0.30	+6.7
2,944,415	+		Sama_2446	0.46	-0.4
2,944,462	+		Sama_2446	0.50	-2.1
2,944,462	+		Sama_2446	0.50	-3.4
2,944,463	-		Sama_2446	0.50	+5.2
2,944,463	-		Sama_2446	0.50	+3.4
2,944,500	-		Sama_2446	0.54	+4.0
2,944,567	+		Sama_2446	0.60	-1.2
2,944,568	-		Sama_2446	0.60	+1.2
2,944,568	-		Sama_2446	0.60	+2.6
2,944,636	+		Sama_2446	0.67	-1.4
2,944,665	-		Sama_2446	0.70	+1.2
2,944,665	-		Sama_2446	0.70	-1.5
2,944,665	-		Sama_2446	0.70	+1.7
2,944,775	+		Sama_2446	0.80	-2.4
2,944,775	+		Sama_2446	0.80	-3.0
2,944,775	+		Sama_2446	0.80	-4.0
2,945,053	+				-1.4
2,945,084	+				-2.2
2,945,085	-				+6.4
2,945,088	+				-1.2
2,945,088	+				-4.0
2,945,089	-				+6.6
2,945,089	-				+4.3
2,945,089	-				+4.7
2,945,089	-				+6.3
2,945,206	+				-1.2
2,945,206	+				-1.5
2,945,207	-				+5.7
2,945,207	-				+5.4
2,945,225	-				+5.1
2,945,269	+		Sama_2447	0.12	+0.4
2,945,270	-		Sama_2447	0.12	+6.1
2,945,270	-		Sama_2447	0.12	+5.4
2,945,297	+		Sama_2447	0.14	-0.5
2,945,336	-		Sama_2447	0.17	+4.6
2,945,480	+		Sama_2447	0.27	-0.4
2,945,480	+		Sama_2447	0.27	+0.8
2,945,481	-		Sama_2447	0.28	+4.6
2,945,481	-		Sama_2447	0.28	+5.0
2,945,481	-		Sama_2447	0.28	+4.5
2,945,481	-		Sama_2447	0.28	+4.0
2,945,516	+		Sama_2447	0.30	-1.0
2,945,516	+		Sama_2447	0.30	-0.1
2,945,517	-		Sama_2447	0.30	+4.9
2,945,517	-		Sama_2447	0.30	+4.8
2,945,517	-		Sama_2447	0.30	+3.8
2,945,517	-		Sama_2447	0.30	+3.4
2,945,520	-		Sama_2447	0.30	+4.3
2,945,520	-		Sama_2447	0.30	+4.2
2,945,786	-		Sama_2447	0.50	+4.3
2,945,948	+		Sama_2447	0.62	+0.3
2,945,958	-		Sama_2447	0.63	+4.6
2,945,958	-		Sama_2447	0.63	+4.6
2,945,978	-		Sama_2447	0.65	+3.4
2,946,083	+		Sama_2447	0.72	-1.2
2,946,083	+		Sama_2447	0.72	-1.0
2,946,083	+		Sama_2447	0.72	+0.1
2,946,083	+		Sama_2447	0.72	-2.2
2,946,083	+		Sama_2447	0.72	-1.2
2,946,083	+		Sama_2447	0.72	+0.0
2,946,084	-		Sama_2447	0.72	+2.2
2,946,084	-		Sama_2447	0.72	+3.2
2,946,084	-		Sama_2447	0.72	+3.8
2,946,084	-		Sama_2447	0.72	+4.2
2,946,084	-		Sama_2447	0.72	+3.5
2,946,084	-		Sama_2447	0.72	+2.3
2,946,138	+		Sama_2447	0.76	-1.5
2,946,139	-		Sama_2447	0.76	+3.4
2,946,181	+		Sama_2447	0.80	-1.4
2,946,181	+		Sama_2447	0.80	+0.2
2,946,181	+		Sama_2447	0.80	+0.3
2,946,182	-		Sama_2447	0.80	+2.8
2,946,324	-				+4.1
2,946,404	+				-2.2
2,946,404	+				-1.1
2,946,404	+				+1.5
2,946,405	-				+2.8
2,946,405	-				+3.6
2,946,405	-				+3.5
2,946,405	-				+3.1
2,946,405	-				+2.9
2,946,405	-				+3.4
2,946,454	+				-0.6
2,946,454	+				-0.2
2,946,454	+				-1.6
2,946,454	+				-2.0
2,946,454	+				-1.0
2,946,455	-				+4.9
2,946,455	-				+2.6
2,946,455	-				+3.1
2,946,455	-				+4.2
2,946,455	-				+3.4
2,946,455	-				+4.1
2,946,455	-				+1.6
2,946,455	-				+4.2
2,946,455	-				+3.2
2,946,455	-				+3.5
2,946,455	-				+3.0
2,946,510	+				-1.6
2,946,510	+				-1.5
2,946,510	+				-1.1
2,946,510	+				+0.4
2,946,511	-				+2.6
2,946,513	-				+3.1
2,946,544	-				+3.5
2,946,555	+				-0.2
2,946,555	+				+1.4
2,946,555	+				+1.6
2,946,556	-				+4.0
2,946,556	-				+3.7
2,946,556	-				+4.6
2,946,556	-				+3.4
2,946,716	-				+3.1
2,946,716	-				+3.0
2,946,722	-				+3.2
2,946,734	-				+2.6
2,946,746	+				+0.1
2,946,747	-				+2.8
2,946,747	-				+3.4
2,946,828	-				+3.6
2,946,901	+		Sama_2448	0.10	+1.9
2,946,988	+		Sama_2448	0.13	-1.8
2,946,989	-		Sama_2448	0.13	+4.0
2,947,030	-		Sama_2448	0.15	+2.5
2,947,219	-		Sama_2448	0.21	+1.4
2,947,219	-		Sama_2448	0.21	+3.0
2,947,230	+		Sama_2448	0.21	+0.6
2,947,230	+		Sama_2448	0.21	+0.5
2,947,230	+		Sama_2448	0.21	-1.4
2,947,231	-		Sama_2448	0.21	+1.1
2,947,231	-		Sama_2448	0.21	+1.7
2,947,231	-		Sama_2448	0.21	+2.6
2,947,231	-		Sama_2448	0.21	+1.3
2,947,238	+		Sama_2448	0.21	-0.5
2,947,268	+		Sama_2448	0.22	+1.5
2,947,286	+		Sama_2448	0.23	+0.9
2,947,286	+		Sama_2448	0.23	+1.1
2,947,286	+		Sama_2448	0.23	+1.5
2,947,286	+		Sama_2448	0.23	-0.8
2,947,286	+		Sama_2448	0.23	+1.6
2,947,286	+		Sama_2448	0.23	+1.5
2,947,286	+		Sama_2448	0.23	+0.6
2,947,286	+		Sama_2448	0.23	+1.1
2,947,286	+		Sama_2448	0.23	+2.9
2,947,286	+		Sama_2448	0.23	-0.2
2,947,286	+		Sama_2448	0.23	+1.1
2,947,286	+		Sama_2448	0.23	+1.9
2,947,286	+		Sama_2448	0.23	-1.6
2,947,286	+		Sama_2448	0.23	+0.4
2,947,286	+		Sama_2448	0.23	+1.2
2,947,286	+		Sama_2448	0.23	+0.9
2,947,286	+		Sama_2448	0.23	+2.1
2,947,287	-		Sama_2448	0.23	+1.6
2,947,287	-		Sama_2448	0.23	+3.1
2,947,287	-		Sama_2448	0.23	+2.0
2,947,287	-		Sama_2448	0.23	+2.3
2,947,287	-		Sama_2448	0.23	+3.1
2,947,287	-		Sama_2448	0.23	+1.8
2,947,287	-		Sama_2448	0.23	+2.0
2,947,287	-		Sama_2448	0.23	+2.3
2,947,287	-		Sama_2448	0.23	+2.5
2,947,287	-		Sama_2448	0.23	+2.1
2,947,287	-		Sama_2448	0.23	+2.1
2,947,287	-		Sama_2448	0.23	+2.4
2,947,287	-		Sama_2448	0.23	+1.9
2,947,288	+		Sama_2448	0.23	-1.5
2,947,288	+		Sama_2448	0.23	+0.8
2,947,288	+		Sama_2448	0.23	+1.2
2,947,289	-		Sama_2448	0.23	+2.5
2,947,289	-		Sama_2448	0.23	+1.8
2,947,289	-		Sama_2448	0.23	+2.7
2,947,359	+		Sama_2448	0.25	-1.0
2,947,359	+		Sama_2448	0.25	-1.5
2,947,360	-		Sama_2448	0.25	+2.2
2,947,370	-		Sama_2448	0.26	+0.8
2,947,379	+		Sama_2448	0.26	-0.5
2,947,407	+		Sama_2448	0.27	-0.2
2,947,408	-		Sama_2448	0.27	+0.5
2,947,408	-		Sama_2448	0.27	-0.1
2,947,408	-		Sama_2448	0.27	+1.5