Strain Fitness in Shewanella amazonensis SB2B around Sama_2446

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,942,971	+		Sama_2445	0.44	-3.0
2,942,971	+		Sama_2445	0.44	-3.2
2,942,971	+		Sama_2445	0.44	-2.3
2,942,972	-		Sama_2445	0.44	-2.7
2,943,012	-		Sama_2445	0.47	-2.8
2,943,178	+		Sama_2445	0.59	-2.1
2,943,192	-		Sama_2445	0.60	-2.9
2,943,194	+		Sama_2445	0.60	-3.0
2,943,194	+		Sama_2445	0.60	-3.5
2,943,194	+		Sama_2445	0.60	-2.5
2,943,275	-		Sama_2445	0.66	-2.1
2,943,305	-		Sama_2445	0.69	-2.7
2,943,316	+		Sama_2445	0.69	-2.2
2,943,317	-		Sama_2445	0.70	-1.0
2,943,317	-		Sama_2445	0.70	-2.4
2,943,317	-		Sama_2445	0.70	-0.6
2,943,363	-		Sama_2445	0.73	-3.1
2,943,363	-		Sama_2445	0.73	-0.5
2,943,363	-		Sama_2445	0.73	-2.8
2,943,363	-		Sama_2445	0.73	-3.5
2,943,363	-		Sama_2445	0.73	-2.2
2,943,368	+		Sama_2445	0.73	-1.8
2,943,399	-		Sama_2445	0.76	-2.0
2,943,489	+		Sama_2445	0.82	-2.6
2,943,490	-		Sama_2445	0.83	-1.0
2,943,532	+		Sama_2445	0.86	-1.8
2,943,532	+		Sama_2445	0.86	-3.1
2,943,533	-		Sama_2445	0.86	-2.6
2,943,533	-		Sama_2445	0.86	-2.1
2,943,533	-		Sama_2445	0.86	-1.2
2,943,563	+		Sama_2445	0.88	-2.5
2,943,564	-		Sama_2445	0.88	-3.7
2,943,564	-		Sama_2445	0.88	-2.2
2,943,625	+				-3.0
2,943,625	+				-2.0
2,943,625	+				-2.1
2,943,626	-				-1.2
2,943,626	-				-1.0
2,943,626	-				-2.8
2,943,626	-				-3.5
2,943,651	+				-2.3
2,943,652	-				-2.5
2,943,667	+				-2.0
2,943,667	+				-3.4
2,943,838	-				+6.9
2,943,838	-				+8.4
2,943,878	+				-0.5
2,943,879	-				+6.9
2,943,880	+				-2.4
2,943,880	+				-0.5
2,943,880	+				-1.6
2,943,881	-				+8.0
2,943,881	-				+5.7
2,943,900	-				+7.3
2,943,914	+				-3.3
2,943,940	+				-2.4
2,943,940	+				-3.7
2,943,941	-				+6.1
2,943,941	-				+8.0
2,944,212	-		Sama_2446	0.26	+7.0
2,944,254	+		Sama_2446	0.30	-2.2
2,944,255	-		Sama_2446	0.30	+6.7
2,944,415	+		Sama_2446	0.46	-0.4
2,944,462	+		Sama_2446	0.50	-2.1
2,944,462	+		Sama_2446	0.50	-3.4
2,944,463	-		Sama_2446	0.50	+5.2
2,944,463	-		Sama_2446	0.50	+3.4
2,944,500	-		Sama_2446	0.54	+4.0
2,944,567	+		Sama_2446	0.60	-1.2
2,944,568	-		Sama_2446	0.60	+1.2
2,944,568	-		Sama_2446	0.60	+2.6
2,944,636	+		Sama_2446	0.67	-1.4
2,944,665	-		Sama_2446	0.70	+1.2
2,944,665	-		Sama_2446	0.70	-1.5
2,944,665	-		Sama_2446	0.70	+1.7
2,944,775	+		Sama_2446	0.80	-2.4
2,944,775	+		Sama_2446	0.80	-3.0
2,944,775	+		Sama_2446	0.80	-4.0
2,945,053	+				-1.4
2,945,084	+				-2.2
2,945,085	-				+6.4
2,945,088	+				-1.2
2,945,088	+				-4.0
2,945,089	-				+6.6
2,945,089	-				+4.3
2,945,089	-				+4.7
2,945,089	-				+6.3
2,945,206	+				-1.2
2,945,206	+				-1.5
2,945,207	-				+5.7
2,945,207	-				+5.4
2,945,225	-				+5.1
2,945,269	+		Sama_2447	0.12	+0.4
2,945,270	-		Sama_2447	0.12	+6.1
2,945,270	-		Sama_2447	0.12	+5.4
2,945,297	+		Sama_2447	0.14	-0.5
2,945,336	-		Sama_2447	0.17	+4.6
2,945,480	+		Sama_2447	0.27	-0.4
2,945,480	+		Sama_2447	0.27	+0.8
2,945,481	-		Sama_2447	0.28	+4.6
2,945,481	-		Sama_2447	0.28	+5.0
2,945,481	-		Sama_2447	0.28	+4.5
2,945,481	-		Sama_2447	0.28	+4.0
2,945,516	+		Sama_2447	0.30	-1.0
2,945,516	+		Sama_2447	0.30	-0.1
2,945,517	-		Sama_2447	0.30	+4.9
2,945,517	-		Sama_2447	0.30	+4.8
2,945,517	-		Sama_2447	0.30	+3.8
2,945,517	-		Sama_2447	0.30	+3.4
2,945,520	-		Sama_2447	0.30	+4.3
2,945,520	-		Sama_2447	0.30	+4.2
2,945,786	-		Sama_2447	0.50	+4.3
2,945,948	+		Sama_2447	0.62	+0.3
2,945,958	-		Sama_2447	0.63	+4.6
2,945,958	-		Sama_2447	0.63	+4.6
2,945,978	-		Sama_2447	0.65	+3.4