Strain Fitness in Shewanella amazonensis SB2B around Sama_2435

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,927,703	+		Sama_2433	0.45	-2.4
2,927,703	+		Sama_2433	0.45	+0.4
2,927,703	+		Sama_2433	0.45	-1.0
2,927,704	-		Sama_2433	0.45	-0.0
2,927,704	-		Sama_2433	0.45	+1.1
2,927,707	+		Sama_2433	0.45	-0.2
2,927,707	+		Sama_2433	0.45	-1.4
2,927,707	+		Sama_2433	0.45	-0.2
2,927,707	+		Sama_2433	0.45	+1.2
2,927,708	-		Sama_2433	0.45	+1.8
2,927,708	-		Sama_2433	0.45	-0.2
2,927,708	-		Sama_2433	0.45	-1.2
2,927,708	-		Sama_2433	0.45	+0.4
2,927,708	-		Sama_2433	0.45	-0.1
2,927,708	-		Sama_2433	0.45	-0.8
2,927,708	-		Sama_2433	0.45	-0.2
2,927,708	-		Sama_2433	0.45	-0.0
2,927,743	-		Sama_2433	0.50	+0.4
2,927,814	+		Sama_2433	0.59	+1.6
2,927,929	-		Sama_2433	0.74	-0.2
2,927,929	-		Sama_2433	0.74	-0.1
2,928,013	+		Sama_2433	0.85	-0.7
2,928,014	-		Sama_2433	0.85	-0.3
2,928,019	-		Sama_2433	0.86	-0.2
2,928,137	+				+0.9
2,928,138	-				-1.7
2,928,142	-				-0.4
2,928,209	+				-0.6
2,928,210	-				-0.5
2,928,210	-				+0.2
2,928,210	-				-0.1
2,928,212	+				-0.2
2,928,213	-				+1.6
2,928,224	+				-0.1
2,928,224	+				-0.2
2,928,224	+				-1.9
2,928,225	-				-0.2
2,928,225	-				-0.9
2,928,225	-				-1.3
2,928,226	+				+0.8
2,928,227	-				-1.2
2,928,238	+				+0.9
2,928,238	+				-0.7
2,928,238	+				+1.8
2,928,238	+				+0.9
2,928,238	+				-0.3
2,928,238	+				+0.8
2,928,238	+				+0.4
2,928,239	-				-0.0
2,928,239	-				-1.0
2,928,239	-				-0.3
2,928,239	-				+0.0
2,928,239	-				-1.2
2,928,239	-				-0.9
2,928,239	-				+1.4
2,928,239	-				+0.1
2,928,239	-				-0.8
2,928,239	-				-2.6
2,928,258	+				+0.9
2,928,268	+				+1.4
2,928,269	-				-0.4
2,928,350	+				-0.8
2,928,350	+				-1.0
2,928,351	-				+0.3
2,928,363	-				-0.2
2,928,363	-				+0.1
2,928,389	+				+0.1
2,928,389	+				-1.2
2,928,421	+				-0.3
2,928,421	+				-0.1
2,928,483	+		Sama_2434	0.24	+1.0
2,928,483	+		Sama_2434	0.24	-0.2
2,928,484	-		Sama_2434	0.25	-1.6
2,928,516	+		Sama_2434	0.38	-2.3
2,928,516	+		Sama_2434	0.38	-0.3
2,928,516	+		Sama_2434	0.38	+0.5
2,928,516	+		Sama_2434	0.38	+0.6
2,928,547	+		Sama_2434	0.51	+0.4
2,928,663	-				+1.8
2,928,723	+				-2.2
2,928,723	+				-1.0
2,928,725	+				-1.6
2,928,726	-				-1.4
2,928,726	-				-0.6
2,928,799	-		Sama_2435	0.15	-2.2
2,928,800	+		Sama_2435	0.15	-1.7
2,928,815	+		Sama_2435	0.17	-1.0
2,928,815	+		Sama_2435	0.17	-1.4
2,928,846	+		Sama_2435	0.21	-1.8
2,928,992	+		Sama_2435	0.37	-0.2
2,929,524	+				-2.6
2,929,543	+				+0.5