Strain Fitness in Shewanella amazonensis SB2B around Sama_2430

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,923,356	+		Sama_2429	0.26	-0.8
2,923,357	-		Sama_2429	0.26	-1.7
2,923,357	-		Sama_2429	0.26	-1.5
2,923,398	+		Sama_2429	0.30	-1.0
2,923,399	-		Sama_2429	0.30	-1.4
2,923,399	-		Sama_2429	0.30	-2.0
2,923,399	-		Sama_2429	0.30	-2.7
2,923,408	-		Sama_2429	0.31	-0.6
2,923,475	+		Sama_2429	0.39	-2.5
2,923,476	-		Sama_2429	0.39	-1.9
2,923,597	+		Sama_2429	0.52	+0.6
2,923,598	-		Sama_2429	0.52	-0.8
2,923,598	-		Sama_2429	0.52	-2.2
2,923,655	+		Sama_2429	0.58	-0.6
2,923,655	+		Sama_2429	0.58	-1.2
2,923,656	-		Sama_2429	0.59	-0.2
2,923,736	+		Sama_2429	0.67	-0.2
2,923,829	-		Sama_2429	0.78	-2.8
2,923,829	-		Sama_2429	0.78	-0.2
2,923,910	+		Sama_2429	0.86	-1.0
2,924,082	-				+0.9
2,924,156	+				+1.1
2,924,165	+				+1.1
2,924,165	+				+1.7
2,924,166	-				+2.4
2,924,166	-				+1.9
2,924,230	-				+0.9
2,924,245	+				+1.5
2,924,245	+				+2.0
2,924,245	+				+1.2
2,924,245	+				+0.0
2,924,246	-				+1.3
2,924,246	-				+2.2
2,924,248	+				+0.9
2,924,248	+				+2.4
2,924,248	+				+1.1
2,924,248	+				+2.6
2,924,249	-				+2.9
2,924,249	-				+2.0
2,924,380	+		Sama_2430	0.50	+2.2
2,924,381	-		Sama_2430	0.50	+2.8
2,924,381	-		Sama_2430	0.50	+1.8
2,924,386	+		Sama_2430	0.52	+1.9
2,924,387	-		Sama_2430	0.52	-0.1
2,924,449	+		Sama_2430	0.76	+1.3
2,924,510	+				+0.3
2,924,510	+				+0.6
2,924,510	+				+1.7
2,924,511	-				-0.1
2,924,552	-				+0.9
2,924,555	+				+0.9
2,924,556	-				+1.7
2,924,571	-				+0.4
2,924,571	-				+0.8
2,924,611	+				+0.5
2,924,611	+				-1.8
2,924,611	+				-0.4
2,924,612	-				-0.1
2,924,612	-				-0.6
2,924,612	-				+0.3
2,924,631	-				-0.6
2,924,634	+				+2.0
2,924,634	+				-1.1
2,924,634	+				+0.9
2,924,635	-				+0.2
2,924,656	+				+0.4
2,924,657	-				-1.5
2,924,679	-				-0.4
2,924,735	+				-2.0
2,924,736	-				-1.0
2,924,736	-				-0.6
2,924,736	-				-1.4
2,925,175	+		Sama_2431	0.31	-1.4