Strain Fitness in Shewanella amazonensis SB2B around Sama_2410

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,895,696	+		Sama_2408	0.61	-1.6
2,895,696	+		Sama_2408	0.61	-2.1
2,895,696	+		Sama_2408	0.61	-0.2
2,895,696	+		Sama_2408	0.61	-1.3
2,895,697	-		Sama_2408	0.61	-1.0
2,895,697	-		Sama_2408	0.61	-1.0
2,895,815	+		Sama_2408	0.81	-1.2
2,895,833	+		Sama_2408	0.84	-2.3
2,895,833	+		Sama_2408	0.84	-2.0
2,895,894	+				-2.1
2,895,985	+				-0.2
2,896,043	-				-0.5
2,896,043	-				-1.5
2,896,075	+		Sama_2409	0.11	-1.0
2,896,075	+		Sama_2409	0.11	+0.1
2,896,076	-		Sama_2409	0.12	-0.1
2,896,076	-		Sama_2409	0.12	+0.5
2,896,102	-		Sama_2409	0.21	-0.5
2,896,102	-		Sama_2409	0.21	-0.2
2,896,102	-		Sama_2409	0.21	+1.8
2,896,123	-		Sama_2409	0.28	-0.3
2,896,240	+		Sama_2409	0.67	+0.9
2,896,244	-		Sama_2409	0.68	+0.6
2,896,244	-		Sama_2409	0.68	-0.5
2,896,320	+				-1.5
2,896,321	-				+2.6
2,896,321	-				-2.2
2,896,321	-				-0.3
2,896,321	-				-0.0
2,896,321	-				+1.8
2,896,321	-				+0.4
2,896,326	-				+1.8
2,896,337	+				+0.1
2,896,337	+				-1.5
2,896,338	-				-1.2
2,896,338	-				-0.5
2,896,339	+				+1.0
2,896,339	+				-1.5
2,896,339	+				-2.2
2,896,339	+				+0.6
2,896,339	+				-0.9
2,896,339	+				+0.0
2,896,339	+				+0.4
2,896,340	-				-1.8
2,896,340	-				+0.9
2,896,340	-				+1.6
2,896,340	-				-0.2
2,896,340	-				+0.6
2,896,340	-				-2.0
2,896,340	-				-0.1
2,896,340	-				-0.6
2,896,340	-				-0.4
2,896,340	-				-1.5
2,896,345	+				+0.4
2,896,345	+				-1.5
2,896,345	+				-1.2
2,896,346	-				-1.2
2,896,346	-				-0.8
2,896,346	-				-0.3
2,896,397	-				+2.4
2,896,397	-				+0.4
2,896,397	-				+0.4
2,896,439	+				-0.5
2,896,451	-				-1.2
2,896,456	-				-1.3
2,896,461	-				+0.9
2,896,489	-				-1.1
2,896,495	-				-0.1
2,896,508	-				+0.6
2,896,562	-				+0.4
2,896,566	+				+0.4
2,896,728	+		Sama_2410	0.12	-0.6
2,896,728	+		Sama_2410	0.12	-1.2
2,896,729	-		Sama_2410	0.13	-2.5
2,896,729	-		Sama_2410	0.13	-1.2
2,896,872	+		Sama_2410	0.32	-2.2
2,896,873	-		Sama_2410	0.33	-0.8
2,896,877	+		Sama_2410	0.33	+1.4
2,896,878	-		Sama_2410	0.33	-1.6
2,896,913	+		Sama_2410	0.38	-2.7
2,896,958	+		Sama_2410	0.44	-2.3
2,896,966	+		Sama_2410	0.45	-2.6
2,896,967	-		Sama_2410	0.46	-1.6
2,897,024	+		Sama_2410	0.53	-2.2
2,897,024	+		Sama_2410	0.53	-1.5
2,897,024	+		Sama_2410	0.53	-3.1
2,897,024	+		Sama_2410	0.53	-2.0
2,897,050	+		Sama_2410	0.57	-2.2
2,897,050	+		Sama_2410	0.57	-0.6
2,897,051	-		Sama_2410	0.57	+0.4
2,897,140	+		Sama_2410	0.69	-2.5
2,897,148	+		Sama_2410	0.71	-3.9
2,897,148	+		Sama_2410	0.71	+0.4
2,897,148	+		Sama_2410	0.71	-1.2
2,897,149	-		Sama_2410	0.71	-1.2
2,897,239	+		Sama_2410	0.83	-1.8
2,897,239	+		Sama_2410	0.83	-2.5
2,897,239	+		Sama_2410	0.83	-2.1
2,897,276	-		Sama_2410	0.88	-1.0
2,897,334	+				-1.3
2,897,335	-				-2.6
2,897,348	+				-0.6
2,897,409	+				+0.2
2,897,441	+				-0.2
2,897,512	-				-2.2
2,897,590	+				-0.5
2,897,689	+		Sama_2411	0.15	-0.4
2,897,690	-		Sama_2411	0.15	+0.2
2,897,690	-		Sama_2411	0.15	-1.0
2,897,770	+		Sama_2411	0.21	-0.6
2,897,782	-		Sama_2411	0.21	-2.0
2,897,782	-		Sama_2411	0.21	-1.5
2,897,846	+		Sama_2411	0.25	-2.3
2,897,846	+		Sama_2411	0.25	+1.9
2,897,849	+		Sama_2411	0.26	-0.2
2,897,849	+		Sama_2411	0.26	+0.1
2,897,849	+		Sama_2411	0.26	-1.1
2,897,849	+		Sama_2411	0.26	+0.4
2,897,849	+		Sama_2411	0.26	-0.1
2,897,850	-		Sama_2411	0.26	-1.3
2,897,850	-		Sama_2411	0.26	+0.4
2,897,850	-		Sama_2411	0.26	-0.1
2,897,906	+		Sama_2411	0.29	+0.5
2,897,938	-		Sama_2411	0.31	+0.7
2,897,951	-		Sama_2411	0.32	+0.9
2,897,972	+		Sama_2411	0.34	-3.0
2,897,973	-		Sama_2411	0.34	-0.2
2,898,091	+		Sama_2411	0.41	-2.2
2,898,108	-		Sama_2411	0.42	-1.7
2,898,108	-		Sama_2411	0.42	+2.4
2,898,200	+		Sama_2411	0.48	+3.4
2,898,200	+		Sama_2411	0.48	-0.6
2,898,262	+		Sama_2411	0.52	-0.2
2,898,262	+		Sama_2411	0.52	-0.3
2,898,342	-		Sama_2411	0.57	-0.5
2,898,355	+		Sama_2411	0.58	+0.1