Strain Fitness in Shewanella amazonensis SB2B around Sama_2276

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,740,216	+		Sama_2274	0.31	+1.1
2,740,217	-		Sama_2274	0.31	+0.9
2,740,217	-		Sama_2274	0.31	+0.3
2,740,217	-		Sama_2274	0.31	-0.8
2,740,217	-		Sama_2274	0.31	-0.0
2,740,217	-		Sama_2274	0.31	-0.6
2,740,217	-		Sama_2274	0.31	-0.3
2,740,218	+		Sama_2274	0.31	-2.6
2,740,218	+		Sama_2274	0.31	-0.7
2,740,218	+		Sama_2274	0.31	+0.5
2,740,218	+		Sama_2274	0.31	+0.8
2,740,218	+		Sama_2274	0.31	-1.3
2,740,218	+		Sama_2274	0.31	-3.7
2,740,219	-		Sama_2274	0.31	-0.4
2,740,219	-		Sama_2274	0.31	+0.2
2,740,219	-		Sama_2274	0.31	-1.0
2,740,219	-		Sama_2274	0.31	-0.0
2,740,219	-		Sama_2274	0.31	+0.1
2,740,219	-		Sama_2274	0.31	+0.3
2,740,219	-		Sama_2274	0.31	+0.3
2,740,219	-		Sama_2274	0.31	-0.1
2,740,219	-		Sama_2274	0.31	-0.3
2,740,219	-		Sama_2274	0.31	-0.0
2,740,219	-		Sama_2274	0.31	-1.1
2,740,222	+		Sama_2274	0.32	+0.1
2,740,223	-		Sama_2274	0.32	+0.0
2,740,223	-		Sama_2274	0.32	+0.8
2,740,223	-		Sama_2274	0.32	+0.3
2,740,223	-		Sama_2274	0.32	+0.0
2,740,223	-		Sama_2274	0.32	+0.2
2,740,223	-		Sama_2274	0.32	-0.4
2,740,251	-		Sama_2274	0.35	-0.6
2,740,270	+		Sama_2274	0.38	+0.7
2,740,285	+		Sama_2274	0.40	+1.3
2,740,286	-		Sama_2274	0.40	+0.2
2,740,321	+		Sama_2274	0.44	-0.3
2,740,322	-		Sama_2274	0.44	-0.2
2,740,322	-		Sama_2274	0.44	+1.0
2,740,352	-		Sama_2274	0.48	+0.6
2,740,442	-		Sama_2274	0.59	+0.3
2,740,531	+		Sama_2274	0.71	+0.2
2,740,531	+		Sama_2274	0.71	-1.3
2,740,531	+		Sama_2274	0.71	+1.2
2,740,531	+		Sama_2274	0.71	-1.5
2,740,531	+		Sama_2274	0.71	+1.3
2,740,531	+		Sama_2274	0.71	+0.2
2,740,531	-		Sama_2274	0.71	-0.8
2,740,531	+		Sama_2274	0.71	-0.5
2,740,531	+		Sama_2274	0.71	-2.2
2,740,532	-		Sama_2274	0.71	-0.5
2,740,532	-		Sama_2274	0.71	-0.3
2,740,532	-		Sama_2274	0.71	+0.1
2,740,532	-		Sama_2274	0.71	+0.1
2,740,532	-		Sama_2274	0.71	-0.8
2,740,532	-		Sama_2274	0.71	-0.0
2,740,532	-		Sama_2274	0.71	+0.2
2,740,532	-		Sama_2274	0.71	-1.0
2,740,532	-		Sama_2274	0.71	+0.3
2,740,532	-		Sama_2274	0.71	-0.5
2,740,544	-		Sama_2274	0.72	-0.2
2,740,544	-		Sama_2274	0.72	-0.6
2,740,564	+		Sama_2274	0.75	+0.4
2,740,564	+		Sama_2274	0.75	-1.0
2,740,584	+		Sama_2274	0.77	+0.6
2,740,584	+		Sama_2274	0.77	+0.4
2,740,585	-		Sama_2274	0.78	-1.4
2,740,585	-		Sama_2274	0.78	+0.6
2,740,623	+		Sama_2274	0.82	+0.7
2,740,623	+		Sama_2274	0.82	-0.7
2,740,624	-		Sama_2274	0.82	+0.3
2,740,624	-		Sama_2274	0.82	-1.3
2,740,627	-		Sama_2274	0.83	-1.3
2,740,721	-				-1.1
2,740,721	-				-0.5
2,740,778	+				+0.9
2,740,779	-				-0.7
2,740,779	-				+0.3
2,740,786	+				-0.0
2,740,787	-				-1.4
2,740,849	-		Sama_2275	0.15	-0.5
2,740,849	-		Sama_2275	0.15	-0.7
2,740,849	-		Sama_2275	0.15	+1.0
2,740,906	-		Sama_2275	0.29	-0.9
2,741,105	-		Sama_2275	0.76	-0.0
2,741,126	-		Sama_2275	0.81	-0.3
2,741,474	+		Sama_2276	0.24	-2.0
2,741,565	-		Sama_2276	0.32	-2.0
2,741,689	-		Sama_2276	0.43	-2.3
2,741,785	-		Sama_2276	0.52	-2.4
2,741,798	-		Sama_2276	0.53	+0.3
2,742,133	-		Sama_2276	0.83	-0.2
2,742,314	-				-1.9
2,742,324	-				+0.3
2,742,324	-				+0.8
2,742,324	-				+1.3
2,742,354	-				-0.1
2,742,424	-				-0.0
2,742,424	-				+0.1
2,742,479	-				-0.3
2,742,621	-		Sama_2277	0.12	-1.2
2,742,674	-		Sama_2277	0.14	+2.3
2,742,674	-		Sama_2277	0.14	+1.3
2,742,674	-		Sama_2277	0.14	-1.4
2,742,674	-		Sama_2277	0.14	+0.6
2,742,704	-		Sama_2277	0.15	-1.0
2,742,728	-		Sama_2277	0.16	-0.9
2,742,772	-		Sama_2277	0.18	-1.2
2,742,795	+		Sama_2277	0.19	+1.3
2,742,796	-		Sama_2277	0.19	-0.7
2,742,796	-		Sama_2277	0.19	-1.3
2,742,796	-		Sama_2277	0.19	-3.4
2,742,811	-		Sama_2277	0.20	+0.6
2,742,811	-		Sama_2277	0.20	+0.7
2,742,850	-		Sama_2277	0.22	-0.1
2,742,859	-		Sama_2277	0.22	-0.0
2,742,859	-		Sama_2277	0.22	+0.2
2,742,953	+		Sama_2277	0.26	-0.9
2,742,953	+		Sama_2277	0.26	+0.4
2,742,954	-		Sama_2277	0.26	+0.6
2,742,973	-		Sama_2277	0.27	-0.4
2,743,104	+		Sama_2277	0.33	-0.0
2,743,104	+		Sama_2277	0.33	+0.9
2,743,105	-		Sama_2277	0.33	-1.4
2,743,105	-		Sama_2277	0.33	-0.3
2,743,105	-		Sama_2277	0.33	+0.4
2,743,111	-		Sama_2277	0.33	+0.6
2,743,125	+		Sama_2277	0.34	-0.7
2,743,155	-		Sama_2277	0.35	-0.3
2,743,224	+		Sama_2277	0.38	+2.5
2,743,247	-		Sama_2277	0.39	+1.5
2,743,253	-		Sama_2277	0.40	-1.9
2,743,253	-		Sama_2277	0.40	+1.7
2,743,319	-		Sama_2277	0.42	-1.0
2,743,319	-		Sama_2277	0.42	-0.3
2,743,319	-		Sama_2277	0.42	-0.4