Strain Fitness in Shewanella amazonensis SB2B around Sama_2246

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,709,834	-		Sama_2244	0.84	-0.8
2,709,862	-		Sama_2244	0.86	-0.7
2,709,862	-		Sama_2244	0.86	+0.3
2,709,862	-		Sama_2244	0.86	-0.6
2,709,909	-		Sama_2244	0.88	-0.4
2,709,909	-		Sama_2244	0.88	-1.2
2,709,927	-		Sama_2244	0.89	+0.9
2,709,955	-				-1.3
2,709,955	-				-1.4
2,709,978	+				+1.0
2,709,979	-				-0.2
2,709,979	-				-0.3
2,710,000	-				-0.5
2,710,108	-				-1.0
2,710,199	-				+0.7
2,710,199	-				-0.4
2,710,271	-		Sama_2245	0.14	+1.9
2,710,291	+		Sama_2245	0.18	-0.7
2,710,292	-		Sama_2245	0.18	+0.8
2,710,292	-		Sama_2245	0.18	+0.1
2,710,292	-		Sama_2245	0.18	+1.6
2,710,292	-		Sama_2245	0.18	+0.6
2,710,292	-		Sama_2245	0.18	-2.7
2,710,300	-		Sama_2245	0.19	+1.2
2,710,300	-		Sama_2245	0.19	-1.0
2,710,300	-		Sama_2245	0.19	+0.4
2,710,333	-		Sama_2245	0.25	-0.2
2,710,333	-		Sama_2245	0.25	+0.1
2,710,333	-		Sama_2245	0.25	-0.3
2,710,335	-		Sama_2245	0.25	+0.2
2,710,335	-		Sama_2245	0.25	-0.8
2,710,335	-		Sama_2245	0.25	-1.3
2,710,372	-		Sama_2245	0.32	+0.9
2,710,379	-		Sama_2245	0.33	+1.3
2,710,382	-		Sama_2245	0.33	+0.3
2,710,396	+		Sama_2245	0.36	-1.5
2,710,396	+		Sama_2245	0.36	-0.3
2,710,397	-		Sama_2245	0.36	+0.6
2,710,397	-		Sama_2245	0.36	-0.3
2,710,397	-		Sama_2245	0.36	+0.9
2,710,415	-		Sama_2245	0.39	+0.0
2,710,415	-		Sama_2245	0.39	+0.5
2,710,517	-		Sama_2245	0.57	+0.2
2,710,520	-		Sama_2245	0.57	-0.1
2,710,520	-		Sama_2245	0.57	+1.3
2,710,551	+		Sama_2245	0.63	+0.6
2,710,552	-		Sama_2245	0.63	+0.1
2,710,561	-		Sama_2245	0.64	-0.0
2,710,567	+		Sama_2245	0.65	+1.8
2,710,568	-		Sama_2245	0.65	-2.0
2,710,568	-		Sama_2245	0.65	+1.9
2,710,713	-				-0.7
2,710,747	-				-0.7
2,710,793	-				+0.8
2,710,865	-		Sama_2246	0.11	-1.3
2,710,907	+		Sama_2246	0.16	+1.3
2,710,943	-		Sama_2246	0.20	-1.9
2,710,943	-		Sama_2246	0.20	-1.0
2,711,215	-		Sama_2246	0.53	-3.1
2,711,215	-		Sama_2246	0.53	-1.9
2,711,227	-		Sama_2246	0.54	-0.7
2,711,475	-		Sama_2246	0.84	-2.2
2,711,519	-		Sama_2246	0.89	-1.0
2,711,552	-				-2.0
2,711,799	-		Sama_2247	0.31	-0.7
2,712,212	-				+0.4