Strain Fitness in Shewanella amazonensis SB2B around Sama_2224

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,686,875	+				-0.8
2,686,875	+				+0.1
2,686,875	+				-0.8
2,686,890	+				-1.6
2,686,890	+				-0.1
2,686,890	+				-0.9
2,686,890	+				-0.1
2,686,890	+				+0.5
2,686,890	+				+1.1
2,686,890	+				+1.8
2,686,890	+				+0.7
2,686,890	+				-0.4
2,686,891	-				-2.9
2,686,946	+				-0.6
2,687,112	+		Sama_2223	0.17	-2.6
2,687,555	+		Sama_2223	0.66	-0.8
2,687,555	+		Sama_2223	0.66	-3.1
2,687,556	-		Sama_2223	0.66	-1.6
2,687,612	+		Sama_2223	0.72	-3.1
2,687,613	-		Sama_2223	0.72	-3.6
2,687,772	+		Sama_2223	0.90	-1.9
2,687,863	+				-0.8
2,687,863	+				-0.3
2,688,249	+		Sama_2224	0.38	-3.1
2,688,528	+		Sama_2224	0.65	-1.6
2,688,561	+		Sama_2224	0.69	-1.9
2,688,639	+		Sama_2224	0.76	-2.8
2,688,727	+		Sama_2224	0.85	-2.4
2,688,921	+				-0.0
2,688,922	-				-2.1
2,688,922	-				-0.6
2,688,922	-				+0.2
2,688,927	-				+0.5
2,689,034	+		Sama_2225	0.26	+0.9
2,689,164	+		Sama_2225	0.52	+0.2
2,689,164	+		Sama_2225	0.52	+2.1
2,689,164	+		Sama_2225	0.52	+0.0
2,689,165	-		Sama_2225	0.52	-0.8
2,689,311	-		Sama_2225	0.81	-0.3
2,689,379	+				-0.1
2,689,380	-				-2.1
2,689,402	+				-0.6
2,689,432	+				+0.1
2,689,501	-				+0.6
2,689,501	-				-2.3
2,689,541	+				+0.2
2,689,549	+				-1.3
2,689,631	+				+0.2
2,689,671	+				+1.0
2,689,681	+				-0.5
2,689,682	-				-1.1
2,689,682	-				+0.1
2,689,682	-				-0.5
2,689,685	-				+0.7
2,689,713	+				-0.0
2,689,713	+				-2.2
2,689,713	+				+0.8
2,689,714	-				+0.2
2,689,761	+				-1.0
2,689,761	+				-0.0
2,689,761	+				-0.6
2,689,761	+				+0.6
2,689,761	+				+1.6
2,689,761	+				-2.6
2,689,761	+				-1.0
2,689,761	+				+0.7
2,689,761	+				-0.0
2,689,761	+				-1.1
2,689,762	-				-0.8
2,689,762	-				+0.0
2,689,762	-				-0.4