Strain Fitness in Shewanella amazonensis SB2B around Sama_2172

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,625,887	+		Sama_2170	0.57	-2.8
2,626,169	-		Sama_2170	0.86	-2.8
2,626,169	-		Sama_2170	0.86	-1.3
2,626,289	+				-1.1
2,626,289	+				-2.6
2,626,289	+				-1.0
2,626,297	+				-2.4
2,626,300	+				-1.0
2,626,301	-				-1.6
2,626,437	+		Sama_2171	0.25	-2.4
2,626,465	+		Sama_2171	0.30	-1.8
2,626,466	-		Sama_2171	0.30	-2.5
2,626,469	+		Sama_2171	0.31	-0.3
2,626,470	-		Sama_2171	0.31	-2.3
2,626,470	-		Sama_2171	0.31	-3.3
2,626,470	-		Sama_2171	0.31	-3.4
2,626,470	-		Sama_2171	0.31	-1.8
2,626,599	-		Sama_2171	0.55	-0.8
2,626,602	-		Sama_2171	0.55	-2.5
2,626,689	+		Sama_2171	0.71	-1.1
2,626,689	+		Sama_2171	0.71	-2.1
2,626,689	+		Sama_2171	0.71	-1.1
2,626,690	-		Sama_2171	0.71	-0.8
2,626,968	+		Sama_2172	0.13	-1.3
2,626,992	+		Sama_2172	0.16	-3.3
2,626,992	+		Sama_2172	0.16	-1.6
2,626,993	-		Sama_2172	0.16	-1.9
2,627,063	+		Sama_2172	0.23	-2.1
2,627,077	-		Sama_2172	0.24	-2.9
2,627,077	-		Sama_2172	0.24	+0.6
2,627,166	+		Sama_2172	0.33	-0.3
2,627,183	+		Sama_2172	0.35	-3.3
2,627,183	+		Sama_2172	0.35	-2.2
2,627,183	+		Sama_2172	0.35	-2.6
2,627,183	+		Sama_2172	0.35	-2.9
2,627,184	-		Sama_2172	0.35	-1.8
2,627,251	+		Sama_2172	0.42	-2.9
2,627,251	+		Sama_2172	0.42	-2.2
2,627,338	-		Sama_2172	0.51	-2.7
2,627,341	-		Sama_2172	0.51	+0.2
2,627,394	+		Sama_2172	0.57	-0.8
2,627,494	+		Sama_2172	0.67	-2.8
2,627,495	-		Sama_2172	0.67	-3.1
2,627,495	-		Sama_2172	0.67	-0.8
2,627,497	-		Sama_2172	0.67	-1.1
2,627,620	+		Sama_2172	0.80	-1.8
2,627,620	+		Sama_2172	0.80	-2.8
2,627,621	-		Sama_2172	0.80	-2.7
2,627,735	-				-2.2
2,627,753	+				-0.8
2,627,766	-				-3.9
2,627,873	+				+0.7
2,627,922	+				-1.3
2,627,922	+				-1.3
2,627,922	+				-1.3
2,627,923	-				-3.0
2,627,923	-				-3.3
2,627,923	-				-1.6
2,627,924	+				-1.1
2,628,017	-				-1.6
2,628,104	+		Sama_2173	0.14	-2.2
2,628,105	-		Sama_2173	0.14	-2.1
2,628,120	+		Sama_2173	0.14	-1.3
2,628,120	+		Sama_2173	0.14	-1.8
2,628,121	-		Sama_2173	0.14	-1.3
2,628,121	-		Sama_2173	0.14	-1.5
2,628,121	-		Sama_2173	0.14	-2.5
2,628,121	-		Sama_2173	0.14	-2.7
2,628,121	-		Sama_2173	0.14	-1.8
2,628,148	+		Sama_2173	0.16	-1.1
2,628,149	-		Sama_2173	0.16	-1.6
2,628,181	+		Sama_2173	0.17	-4.3
2,628,391	+		Sama_2173	0.27	-0.8
2,628,392	-		Sama_2173	0.27	-1.9
2,628,392	-		Sama_2173	0.27	-3.1
2,628,478	-		Sama_2173	0.31	-2.7
2,628,659	+		Sama_2173	0.40	-1.8
2,628,659	+		Sama_2173	0.40	-1.9
2,628,660	-		Sama_2173	0.40	-3.6