Strain Fitness in Shewanella amazonensis SB2B around Sama_2170

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,624,360	+				+0.4
2,624,360	+				+1.5
2,624,361	-				-0.8
2,624,366	+				+0.7
2,624,371	+				+1.7
2,624,371	+				-0.3
2,624,371	+				-0.3
2,624,471	-				-2.8
2,624,481	+				+0.5
2,624,503	-		Sama_2169	0.12	-2.1
2,624,630	+		Sama_2169	0.25	+0.2
2,624,630	+		Sama_2169	0.25	-2.6
2,624,631	-		Sama_2169	0.25	-3.8
2,624,631	-		Sama_2169	0.25	-2.1
2,624,631	-		Sama_2169	0.25	-0.8
2,624,671	+		Sama_2169	0.30	-1.3
2,624,672	-		Sama_2169	0.30	-2.7
2,624,686	+		Sama_2169	0.31	-0.9
2,624,686	+		Sama_2169	0.31	-1.8
2,624,783	+		Sama_2169	0.41	-2.7
2,624,846	+		Sama_2169	0.48	-1.8
2,624,847	-		Sama_2169	0.48	-3.5
2,624,847	-		Sama_2169	0.48	-1.2
2,624,901	-		Sama_2169	0.54	-2.3
2,624,932	+		Sama_2169	0.57	-0.3
2,624,932	+		Sama_2169	0.57	-1.8
2,624,932	+		Sama_2169	0.57	-1.8
2,625,013	+		Sama_2169	0.65	-2.3
2,625,013	+		Sama_2169	0.65	-2.1
2,625,032	+		Sama_2169	0.67	-4.0
2,625,032	+		Sama_2169	0.67	-0.8
2,625,056	+		Sama_2169	0.70	-1.9
2,625,056	+		Sama_2169	0.70	-2.5
2,625,056	+		Sama_2169	0.70	-1.9
2,625,056	+		Sama_2169	0.70	-2.6
2,625,056	+		Sama_2169	0.70	-2.6
2,625,056	+		Sama_2169	0.70	-1.1
2,625,057	-		Sama_2169	0.70	-0.8
2,625,057	-		Sama_2169	0.70	-1.8
2,625,057	-		Sama_2169	0.70	-1.8
2,625,057	-		Sama_2169	0.70	-3.5
2,625,058	+		Sama_2169	0.70	-1.8
2,625,058	+		Sama_2169	0.70	+0.2
2,625,058	+		Sama_2169	0.70	-3.7
2,625,058	+		Sama_2169	0.70	-2.5
2,625,058	+		Sama_2169	0.70	-1.8
2,625,058	+		Sama_2169	0.70	-3.1
2,625,058	+		Sama_2169	0.70	-2.2
2,625,059	-		Sama_2169	0.70	-1.6
2,625,059	-		Sama_2169	0.70	-1.6
2,625,059	-		Sama_2169	0.70	-1.6
2,625,094	+		Sama_2169	0.74	-3.3
2,625,094	+		Sama_2169	0.74	-1.6
2,625,095	-		Sama_2169	0.74	-1.3
2,625,098	+		Sama_2169	0.74	-1.3
2,625,099	-		Sama_2169	0.74	-2.7
2,625,099	-		Sama_2169	0.74	+0.2
2,625,099	-		Sama_2169	0.74	-1.1
2,625,128	+		Sama_2169	0.77	-1.1
2,625,129	-		Sama_2169	0.78	-1.9
2,625,129	-		Sama_2169	0.78	-3.0
2,625,366	+				-0.5
2,625,366	+				-3.0
2,625,366	+				-1.9
2,625,366	+				-2.5
2,625,367	-				-0.3
2,625,367	-				-2.7
2,625,489	+		Sama_2170	0.15	-2.1
2,625,686	-		Sama_2170	0.36	-3.1
2,625,686	-		Sama_2170	0.36	-2.0
2,625,758	+		Sama_2170	0.43	-1.1
2,625,759	-		Sama_2170	0.43	-0.8
2,625,759	-		Sama_2170	0.43	-2.1
2,625,832	-		Sama_2170	0.51	-2.2
2,625,887	+		Sama_2170	0.57	-2.8
2,626,169	-		Sama_2170	0.86	-2.8
2,626,169	-		Sama_2170	0.86	-1.3
2,626,289	+				-1.1
2,626,289	+				-2.6
2,626,289	+				-1.0
2,626,297	+				-2.4
2,626,300	+				-1.0
2,626,301	-				-1.6
2,626,437	+		Sama_2171	0.25	-2.4
2,626,465	+		Sama_2171	0.30	-1.8
2,626,466	-		Sama_2171	0.30	-2.5
2,626,469	+		Sama_2171	0.31	-0.3
2,626,470	-		Sama_2171	0.31	-2.3
2,626,470	-		Sama_2171	0.31	-3.3
2,626,470	-		Sama_2171	0.31	-3.4
2,626,470	-		Sama_2171	0.31	-1.8
2,626,599	-		Sama_2171	0.55	-0.8
2,626,602	-		Sama_2171	0.55	-2.5
2,626,689	+		Sama_2171	0.71	-1.1
2,626,689	+		Sama_2171	0.71	-2.1
2,626,689	+		Sama_2171	0.71	-1.1
2,626,690	-		Sama_2171	0.71	-0.8
2,626,968	+		Sama_2172	0.13	-1.3
2,626,992	+		Sama_2172	0.16	-3.3
2,626,992	+		Sama_2172	0.16	-1.6
2,626,993	-		Sama_2172	0.16	-1.9
2,627,063	+		Sama_2172	0.23	-2.1
2,627,077	-		Sama_2172	0.24	-2.9
2,627,077	-		Sama_2172	0.24	+0.6
2,627,166	+		Sama_2172	0.33	-0.3
2,627,183	+		Sama_2172	0.35	-3.3
2,627,183	+		Sama_2172	0.35	-2.2
2,627,183	+		Sama_2172	0.35	-2.6
2,627,183	+		Sama_2172	0.35	-2.9
2,627,184	-		Sama_2172	0.35	-1.8
2,627,251	+		Sama_2172	0.42	-2.9
2,627,251	+		Sama_2172	0.42	-2.2