Strain Fitness in Shewanella amazonensis SB2B around Sama_2048

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,483,001	-				-0.0
2,483,031	-				-1.8
2,483,031	-				-0.3
2,483,096	-		Sama_2047	0.14	-0.2
2,483,096	-		Sama_2047	0.14	+0.6
2,483,115	-		Sama_2047	0.17	+1.3
2,483,137	-		Sama_2047	0.20	+0.2
2,483,175	-		Sama_2047	0.26	+0.5
2,483,175	-		Sama_2047	0.26	+1.2
2,483,235	-		Sama_2047	0.36	-0.2
2,483,241	-		Sama_2047	0.37	-0.6
2,483,352	-		Sama_2047	0.54	+0.1
2,483,363	-		Sama_2047	0.56	+0.2
2,483,363	-		Sama_2047	0.56	+0.0
2,483,363	-		Sama_2047	0.56	+1.9
2,483,363	-		Sama_2047	0.56	-0.5
2,483,363	-		Sama_2047	0.56	+0.5
2,483,369	-		Sama_2047	0.57	+0.0
2,483,369	-		Sama_2047	0.57	-0.4
2,483,456	-		Sama_2047	0.70	+0.4
2,483,456	-		Sama_2047	0.70	+1.3
2,483,456	-		Sama_2047	0.70	-0.2
2,483,504	-		Sama_2047	0.78	+2.1
2,483,521	-		Sama_2047	0.80	-1.3
2,483,521	-		Sama_2047	0.80	-0.4
2,483,524	-		Sama_2047	0.81	+0.2
2,483,524	-		Sama_2047	0.81	+0.8
2,483,524	-		Sama_2047	0.81	+2.2
2,483,524	-		Sama_2047	0.81	+1.0
2,483,524	-		Sama_2047	0.81	+0.7
2,483,530	-		Sama_2047	0.82	-1.4
2,483,530	-		Sama_2047	0.82	+0.8
2,483,567	-		Sama_2047	0.88	+0.1
2,483,567	-		Sama_2047	0.88	+0.0
2,483,567	-		Sama_2047	0.88	+0.2
2,483,567	-		Sama_2047	0.88	+0.7
2,483,567	-		Sama_2047	0.88	-1.0
2,483,569	-		Sama_2047	0.88	-0.2
2,483,652	-				-0.1
2,483,737	-				-2.1
2,483,751	-				-3.7
2,483,751	-				-2.1
2,483,751	-				-3.0
2,483,851	-		Sama_2048	0.17	-2.9
2,483,851	-		Sama_2048	0.17	-3.4
2,483,888	+		Sama_2048	0.21	-2.1
2,483,950	-		Sama_2048	0.26	-1.8
2,483,950	-		Sama_2048	0.26	-3.2
2,483,976	-		Sama_2048	0.29	-1.6
2,484,018	-		Sama_2048	0.32	-2.4
2,484,084	-		Sama_2048	0.38	-3.4
2,484,084	-		Sama_2048	0.38	-3.3
2,484,084	-		Sama_2048	0.38	-1.1
2,484,291	-		Sama_2048	0.57	-2.1
2,484,331	+		Sama_2048	0.60	-2.4
2,484,331	+		Sama_2048	0.60	-3.9
2,484,331	+		Sama_2048	0.60	-0.8
2,484,332	-		Sama_2048	0.61	-0.8
2,484,332	-		Sama_2048	0.61	-3.0
2,484,332	-		Sama_2048	0.61	-2.3
2,484,480	-		Sama_2048	0.74	-1.1
2,484,571	-		Sama_2048	0.82	-1.5
2,484,571	-		Sama_2048	0.82	-2.5
2,484,571	-		Sama_2048	0.82	-3.9
2,484,583	+		Sama_2048	0.83	-4.3
2,484,584	-		Sama_2048	0.83	-2.0
2,484,584	-		Sama_2048	0.83	-1.4
2,484,608	-		Sama_2048	0.85	-3.0
2,484,718	-				-3.5
2,484,718	-				-1.6
2,484,765	+				-0.8
2,484,766	-				-3.8
2,484,766	-				-1.6
2,484,776	-				-0.4
2,484,776	-				-2.7
2,484,779	-				-2.5
2,484,779	-				-3.7
2,484,779	-				-3.0
2,484,779	-				-2.5
2,484,779	-				-2.4
2,484,807	+				-1.5
2,484,807	+				-0.8
2,484,808	-				-1.4
2,484,808	-				+1.3
2,484,808	-				+0.1
2,484,808	-				-0.8
2,484,808	-				-0.8
2,484,889	+				+1.3
2,484,889	+				+0.9
2,484,889	+				+1.4
2,484,893	+				-0.6