Strain Fitness in Shewanella amazonensis SB2B around Sama_2046

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,481,461	-				-0.4
2,481,559	-				+0.4
2,481,631	-		Sama_2045	0.15	-0.9
2,481,631	-		Sama_2045	0.15	-0.9
2,481,631	-		Sama_2045	0.15	-1.1
2,481,732	-		Sama_2045	0.27	-0.6
2,481,732	-		Sama_2045	0.27	+2.2
2,481,732	-		Sama_2045	0.27	-0.0
2,481,732	-		Sama_2045	0.27	-1.4
2,481,788	-		Sama_2045	0.33	-1.4
2,481,788	-		Sama_2045	0.33	-1.8
2,481,949	-		Sama_2045	0.51	-0.6
2,481,949	-		Sama_2045	0.51	+0.2
2,482,029	-		Sama_2045	0.60	+0.6
2,482,057	-		Sama_2045	0.63	-1.4
2,482,120	-		Sama_2045	0.70	-0.3
2,482,120	-		Sama_2045	0.70	+0.2
2,482,127	-		Sama_2045	0.71	+0.8
2,482,127	-		Sama_2045	0.71	+0.2
2,482,184	-		Sama_2045	0.78	-0.8
2,482,357	-				+1.4
2,482,442	-				-1.3
2,482,442	-				-1.4
2,482,466	-	dcd	Sama_2046	0.13	-0.8
2,482,513	-	dcd	Sama_2046	0.21	-1.1
2,483,001	-				-0.0
2,483,031	-				-1.8
2,483,031	-				-0.3
2,483,096	-		Sama_2047	0.14	-0.2
2,483,096	-		Sama_2047	0.14	+0.6
2,483,115	-		Sama_2047	0.17	+1.3
2,483,137	-		Sama_2047	0.20	+0.2
2,483,175	-		Sama_2047	0.26	+0.5
2,483,175	-		Sama_2047	0.26	+1.2
2,483,235	-		Sama_2047	0.36	-0.2
2,483,241	-		Sama_2047	0.37	-0.6
2,483,352	-		Sama_2047	0.54	+0.1
2,483,363	-		Sama_2047	0.56	+0.2
2,483,363	-		Sama_2047	0.56	+0.0
2,483,363	-		Sama_2047	0.56	+1.9
2,483,363	-		Sama_2047	0.56	-0.5
2,483,363	-		Sama_2047	0.56	+0.5
2,483,369	-		Sama_2047	0.57	+0.0
2,483,369	-		Sama_2047	0.57	-0.4
2,483,456	-		Sama_2047	0.70	+0.4
2,483,456	-		Sama_2047	0.70	+1.3
2,483,456	-		Sama_2047	0.70	-0.2
2,483,504	-		Sama_2047	0.78	+2.1
2,483,521	-		Sama_2047	0.80	-1.3
2,483,521	-		Sama_2047	0.80	-0.4
2,483,524	-		Sama_2047	0.81	+0.2
2,483,524	-		Sama_2047	0.81	+0.8
2,483,524	-		Sama_2047	0.81	+2.2
2,483,524	-		Sama_2047	0.81	+1.0
2,483,524	-		Sama_2047	0.81	+0.7
2,483,530	-		Sama_2047	0.82	-1.4
2,483,530	-		Sama_2047	0.82	+0.8
2,483,567	-		Sama_2047	0.88	+0.1
2,483,567	-		Sama_2047	0.88	+0.0
2,483,567	-		Sama_2047	0.88	+0.2
2,483,567	-		Sama_2047	0.88	+0.7
2,483,567	-		Sama_2047	0.88	-1.0
2,483,569	-		Sama_2047	0.88	-0.2
2,483,652	-				-0.1
2,483,737	-				-2.1
2,483,751	-				-3.7
2,483,751	-				-2.1
2,483,751	-				-3.0
2,483,851	-		Sama_2048	0.17	-2.9
2,483,851	-		Sama_2048	0.17	-3.4
2,483,888	+		Sama_2048	0.21	-2.1
2,483,950	-		Sama_2048	0.26	-1.8
2,483,950	-		Sama_2048	0.26	-3.2
2,483,976	-		Sama_2048	0.29	-1.6