Strain Fitness in Shewanella amazonensis SB2B around Sama_2042

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,477,938	+		Sama_2040	0.21	+0.8
2,477,939	-		Sama_2040	0.22	-1.0
2,477,988	+		Sama_2040	0.28	+0.9
2,477,989	-		Sama_2040	0.28	+1.5
2,478,043	+		Sama_2040	0.35	-1.6
2,478,044	-		Sama_2040	0.35	-0.4
2,478,189	-		Sama_2040	0.53	-0.6
2,478,189	-		Sama_2040	0.53	-1.2
2,478,189	-		Sama_2040	0.53	-0.0
2,478,189	-		Sama_2040	0.53	+0.6
2,478,191	+		Sama_2040	0.53	-1.0
2,478,191	+		Sama_2040	0.53	+0.4
2,478,192	-		Sama_2040	0.54	+1.7
2,478,192	-		Sama_2040	0.54	-0.8
2,478,260	-		Sama_2040	0.62	-0.8
2,478,262	+		Sama_2040	0.62	-0.8
2,478,262	+		Sama_2040	0.62	-0.8
2,478,263	-		Sama_2040	0.63	-0.0
2,478,263	-		Sama_2040	0.63	-0.4
2,478,263	-		Sama_2040	0.63	+0.2
2,478,263	-		Sama_2040	0.63	+0.3
2,478,266	-		Sama_2040	0.63	-0.0
2,478,288	-		Sama_2040	0.66	-0.2
2,478,349	-		Sama_2040	0.74	-2.0
2,478,454	+		Sama_2040	0.87	-0.1
2,478,454	+		Sama_2040	0.87	-0.2
2,478,455	-		Sama_2040	0.87	+0.6
2,478,455	-		Sama_2040	0.87	+0.2
2,478,455	-		Sama_2040	0.87	-2.2
2,478,489	-				+0.6
2,478,523	-				-2.1
2,478,576	-				+0.6
2,478,604	+				+0.6
2,478,605	-				+0.1
2,478,611	+				+1.9
2,478,612	-				-1.0
2,478,753	+		Sama_2041	0.46	-0.7
2,478,753	+		Sama_2041	0.46	+1.6
2,478,754	-		Sama_2041	0.46	-1.6
2,478,754	-		Sama_2041	0.46	-1.5
2,478,754	-		Sama_2041	0.46	-1.1
2,478,866	+		Sama_2041	0.80	-1.2
2,478,867	-		Sama_2041	0.81	+1.1
2,478,875	+		Sama_2041	0.83	+0.5
2,478,875	+		Sama_2041	0.83	+0.2
2,478,877	+		Sama_2041	0.84	-0.4
2,478,877	+		Sama_2041	0.84	-0.8
2,478,878	-		Sama_2041	0.84	-0.4
2,478,878	-		Sama_2041	0.84	-0.8
2,478,878	-		Sama_2041	0.84	-0.8
2,478,886	+		Sama_2041	0.87	+0.4
2,478,887	-		Sama_2041	0.87	+1.4
2,478,934	+				-0.9
2,478,935	-				+0.2
2,478,945	+				-0.8
2,479,848	-				+0.5
2,479,879	-				+0.7
2,479,879	-				-0.1
2,479,879	-				+0.7
2,480,587	-		Sama_2044	0.10	-1.9
2,480,651	-		Sama_2044	0.17	-0.9
2,480,798	-		Sama_2044	0.32	+2.2