Strain Fitness in Shewanella amazonensis SB2B around Sama_1956

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,385,611	+		Sama_1955	0.61	-0.0
2,385,705	-		Sama_1955	0.64	+0.1
2,385,764	+		Sama_1955	0.67	-0.4
2,385,764	+		Sama_1955	0.67	+0.4
2,385,764	+		Sama_1955	0.67	+0.6
2,385,764	+		Sama_1955	0.67	+0.2
2,385,764	+		Sama_1955	0.67	+0.4
2,385,764	+		Sama_1955	0.67	+0.8
2,385,765	-		Sama_1955	0.67	-0.8
2,385,812	+		Sama_1955	0.69	+0.8
2,385,812	+		Sama_1955	0.69	-0.1
2,385,812	+		Sama_1955	0.69	-0.3
2,385,813	-		Sama_1955	0.69	+0.9
2,385,906	+		Sama_1955	0.72	+0.0
2,385,907	-		Sama_1955	0.72	+0.9
2,385,907	-		Sama_1955	0.72	-0.1
2,385,989	+		Sama_1955	0.76	-1.9
2,385,989	+		Sama_1955	0.76	-0.8
2,386,037	+		Sama_1955	0.77	-0.4
2,386,038	-		Sama_1955	0.77	-0.6
2,386,038	-		Sama_1955	0.77	-0.9
2,386,070	+		Sama_1955	0.79	+1.7
2,386,070	+		Sama_1955	0.79	+1.1
2,386,203	+		Sama_1955	0.84	+1.9
2,386,203	+		Sama_1955	0.84	-0.6
2,386,204	-		Sama_1955	0.84	+0.6
2,386,238	+		Sama_1955	0.85	-0.2
2,386,239	-		Sama_1955	0.85	+0.1
2,386,312	-		Sama_1955	0.88	-0.5
2,386,312	-		Sama_1955	0.88	+0.0
2,386,312	-		Sama_1955	0.88	-2.3
2,386,392	+				+0.4
2,386,412	+				-0.2
2,386,412	+				-1.7
2,386,576	-				+1.0
2,386,576	-				+1.2
2,386,595	+				-0.8
2,386,630	+				+0.8
2,386,659	+				+1.7
2,386,693	-				+0.1
2,386,877	+		Sama_1956	0.31	+1.9
2,386,933	-		Sama_1956	0.37	-0.4
2,386,968	-		Sama_1956	0.41	+1.1
2,386,978	-		Sama_1956	0.43	+1.8
2,387,035	+		Sama_1956	0.49	+0.4
2,387,035	+		Sama_1956	0.49	+1.8
2,387,035	+		Sama_1956	0.49	+1.4
2,387,035	+		Sama_1956	0.49	+1.2
2,387,036	-		Sama_1956	0.49	+0.5
2,387,036	-		Sama_1956	0.49	+2.3
2,387,074	+		Sama_1956	0.54	+0.9
2,387,075	-		Sama_1956	0.54	+0.6
2,387,075	-		Sama_1956	0.54	+1.6
2,387,153	+		Sama_1956	0.63	+1.0
2,387,154	-		Sama_1956	0.63	-0.1
2,387,250	-		Sama_1956	0.74	+1.1
2,387,335	-		Sama_1956	0.84	+1.8
2,387,335	-		Sama_1956	0.84	+1.6
2,387,336	+		Sama_1956	0.84	-0.2
2,387,337	-		Sama_1956	0.84	+1.4
2,387,337	-		Sama_1956	0.84	+0.7
2,387,348	+		Sama_1956	0.85	+0.7
2,387,660	+		Sama_1957	0.21	-0.2
2,387,660	+		Sama_1957	0.21	-0.4
2,387,808	+		Sama_1957	0.61	-0.4
2,387,864	+		Sama_1957	0.76	-0.1
2,387,865	-		Sama_1957	0.77	-0.3
2,387,875	-		Sama_1957	0.79	-0.7
2,387,918	-				+1.0
2,388,117	-		Sama_1958	0.37	-0.1
2,388,150	+		Sama_1958	0.47	+0.2
2,388,151	-		Sama_1958	0.47	+0.6
2,388,248	-		Sama_1958	0.75	+0.3
2,388,293	-		Sama_1958	0.87	+0.4
2,388,296	+		Sama_1958	0.88	+0.4
2,388,297	-		Sama_1958	0.89	+1.2
2,388,297	-		Sama_1958	0.89	+1.5
2,388,302	-				+0.1
2,388,302	-				+0.6
2,388,315	-				-1.6
2,388,348	+				-0.6
2,388,386	-				-0.5
2,388,432	-				-0.3