Strain Fitness in Shewanella amazonensis SB2B around Sama_1953

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,382,146	+				+2.5
2,382,229	-				+1.2
2,382,229	-				-2.6
2,382,290	+				-0.9
2,382,291	-				+0.6
2,382,302	-				+0.5
2,382,350	-				+0.0
2,382,350	-				+2.2
2,382,363	+				+0.6
2,382,363	+				-0.7
2,382,366	+				+0.3
2,382,391	-				+0.5
2,382,396	+				-0.3
2,382,396	+				+0.5
2,382,396	+				-0.0
2,382,397	-				-3.1
2,382,397	-				+0.3
2,382,397	-				-0.9
2,382,463	+				-1.9
2,382,464	-				+1.2
2,382,606	+		Sama_1954	0.12	-0.9
2,382,606	+		Sama_1954	0.12	-0.3
2,382,607	-		Sama_1954	0.12	-0.3
2,382,607	-		Sama_1954	0.12	+0.4
2,382,647	-		Sama_1954	0.14	-0.7
2,382,647	-		Sama_1954	0.14	+0.9
2,382,649	-		Sama_1954	0.14	-0.1
2,382,704	+		Sama_1954	0.18	-0.0
2,382,837	+		Sama_1954	0.27	+2.0
2,382,879	+		Sama_1954	0.30	-2.1
2,382,879	+		Sama_1954	0.30	+0.1
2,382,919	-		Sama_1954	0.32	+0.2
2,382,940	+		Sama_1954	0.34	-0.8
2,382,940	+		Sama_1954	0.34	+0.0
2,382,940	+		Sama_1954	0.34	+0.6
2,382,941	-		Sama_1954	0.34	-0.1
2,382,941	-		Sama_1954	0.34	-0.2
2,382,941	-		Sama_1954	0.34	-0.6
2,382,970	+		Sama_1954	0.36	-2.5
2,382,970	+		Sama_1954	0.36	-1.4
2,382,970	+		Sama_1954	0.36	+0.4
2,382,971	-		Sama_1954	0.36	+0.7
2,382,972	+		Sama_1954	0.36	-0.3