Strain Fitness in Shewanella amazonensis SB2B around Sama_1950

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,376,326	+				-2.0
2,376,326	+				+1.5
2,376,326	+				+0.8
2,376,326	+				-0.9
2,376,326	+				-0.4
2,376,326	+				+0.1
2,376,327	-				+0.8
2,376,327	-				-0.4
2,376,327	-				-0.7
2,376,327	-				-0.7
2,376,327	-				+0.7
2,376,327	-				+1.4
2,376,327	-				-0.1
2,376,327	-				-1.1
2,376,327	-				-0.8
2,376,327	-				-2.4
2,376,327	-				+0.5
2,376,348	+				-0.6
2,376,392	+		Sama_1949	0.12	-2.6
2,376,435	-		Sama_1949	0.16	-0.8
2,376,468	+		Sama_1949	0.20	-0.5
2,376,534	+		Sama_1949	0.26	-1.5
2,376,537	-		Sama_1949	0.27	-0.7
2,376,572	+		Sama_1949	0.30	-1.1
2,376,830	-		Sama_1949	0.56	-0.4
2,376,866	+		Sama_1949	0.60	-0.0
2,376,867	-		Sama_1949	0.60	+2.0
2,376,897	-		Sama_1949	0.63	+0.1
2,376,932	+		Sama_1949	0.67	-0.6
2,377,113	+		Sama_1949	0.85	+0.2
2,377,195	-				-0.4
2,377,195	-				+0.0
2,377,277	-				+0.1
2,377,290	+				-1.8
2,377,290	+				+0.1
2,377,291	-				-0.4
2,377,291	-				-2.0
2,377,291	-				+0.2
2,377,291	-				-0.1
2,377,291	-				-0.1
2,377,291	-				+1.3
2,377,292	+				-0.7
2,377,324	-				-3.1
2,377,376	-				-0.4
2,377,378	-				-1.8
2,377,611	-		Sama_1950	0.32	-2.0
2,377,710	+		Sama_1950	0.43	-1.6
2,377,768	+		Sama_1950	0.49	-2.0
2,377,832	+		Sama_1950	0.56	-1.0
2,377,842	-		Sama_1950	0.57	-1.4
2,378,051	-		Sama_1950	0.79	-1.4
2,378,254	-				-0.8
2,378,265	-				+0.0
2,378,541	-	ihfA	Sama_1951	0.73	+0.8
2,378,541	-	ihfA	Sama_1951	0.73	+1.0
2,378,541	-	ihfA	Sama_1951	0.73	+0.0
2,378,626	-				-0.4
2,378,626	-				-1.4
2,378,626	-				+1.4