Strain Fitness in Shewanella amazonensis SB2B around Sama_1900

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,317,599	+		Sama_1899	0.57	-0.4
2,317,600	-		Sama_1899	0.57	-1.1
2,317,600	-		Sama_1899	0.57	-0.1
2,317,610	-		Sama_1899	0.58	-1.6
2,317,653	-		Sama_1899	0.60	-0.5
2,317,674	+		Sama_1899	0.61	-1.9
2,317,674	+		Sama_1899	0.61	-1.6
2,317,697	-		Sama_1899	0.62	-1.4
2,317,734	+		Sama_1899	0.64	+0.6
2,317,734	+		Sama_1899	0.64	+0.6
2,317,759	+		Sama_1899	0.65	-1.6
2,317,792	+		Sama_1899	0.67	-2.0
2,317,804	+		Sama_1899	0.67	-0.0
2,317,805	-		Sama_1899	0.67	+0.3
2,317,805	-		Sama_1899	0.67	+1.9
2,317,805	-		Sama_1899	0.67	-0.8
2,317,805	-		Sama_1899	0.67	+0.4
2,317,810	+		Sama_1899	0.67	-0.0
2,317,810	+		Sama_1899	0.67	-3.6
2,317,810	+		Sama_1899	0.67	+0.9
2,317,810	+		Sama_1899	0.67	+0.0
2,317,811	-		Sama_1899	0.67	-0.3
2,317,811	-		Sama_1899	0.67	-0.4
2,317,811	-		Sama_1899	0.67	+0.7
2,317,811	-		Sama_1899	0.67	+0.9
2,317,811	-		Sama_1899	0.67	-0.5
2,317,811	-		Sama_1899	0.67	+0.6
2,317,811	-		Sama_1899	0.67	-1.1
2,317,812	+		Sama_1899	0.67	-1.6
2,317,812	+		Sama_1899	0.67	+1.0
2,317,812	+		Sama_1899	0.67	-0.3
2,317,813	-		Sama_1899	0.68	+0.9
2,317,813	-		Sama_1899	0.68	+0.2
2,317,883	+		Sama_1899	0.71	-0.2
2,317,884	-		Sama_1899	0.71	-2.1
2,317,940	-		Sama_1899	0.74	+0.4
2,317,940	-		Sama_1899	0.74	-0.6
2,317,968	+		Sama_1899	0.75	+0.1
2,317,969	-		Sama_1899	0.75	-1.4
2,318,020	-		Sama_1899	0.78	+0.1
2,318,020	-		Sama_1899	0.78	-2.1
2,318,039	+		Sama_1899	0.78	+1.5
2,318,039	+		Sama_1899	0.78	-0.9
2,318,039	+		Sama_1899	0.78	-1.9
2,318,039	+		Sama_1899	0.78	+1.4
2,318,039	+		Sama_1899	0.78	-0.6
2,318,040	-		Sama_1899	0.79	+1.9
2,318,083	-		Sama_1899	0.81	-1.0
2,318,083	-		Sama_1899	0.81	+0.2
2,318,083	-		Sama_1899	0.81	-0.8
2,318,117	+		Sama_1899	0.82	+0.7
2,318,129	+		Sama_1899	0.83	-0.2
2,318,138	+		Sama_1899	0.83	-0.3
2,318,138	+		Sama_1899	0.83	-1.3
2,318,138	+		Sama_1899	0.83	-0.1
2,318,138	+		Sama_1899	0.83	+0.6
2,318,371	+				+0.8
2,318,371	+				+0.3
2,318,371	+				-1.1
2,318,372	-				-0.4
2,318,372	-				-0.5
2,318,372	-				-0.0
2,318,372	-				-0.3
2,318,373	+				-0.6
2,318,373	+				-0.1
2,318,373	+				+0.6
2,318,373	+				+0.4
2,318,374	-				+0.3
2,318,374	-				-0.2
2,318,374	-				-0.7
2,318,374	-				-0.1
2,318,374	-				+1.4
2,318,374	-				-0.4
2,318,496	+				-0.7
2,318,534	+				-2.3
2,318,573	+				-0.0
2,322,038	+				-0.2
2,322,066	+				-0.4