Strain Fitness in Shewanella amazonensis SB2B around Sama_1734

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,122,956	+		Sama_1733	0.56	+1.1
2,123,036	-		Sama_1733	0.63	+1.4
2,123,129	+		Sama_1733	0.70	+0.7
2,123,276	+		Sama_1733	0.83	-0.3
2,123,288	-		Sama_1733	0.84	+1.1
2,123,288	-		Sama_1733	0.84	+0.5
2,123,288	-		Sama_1733	0.84	-0.5
2,123,374	+				-1.3
2,123,422	+				+0.7
2,123,422	+				+0.5
2,123,481	-				+0.1
2,123,481	-				+1.5
2,123,490	+				-0.6
2,123,490	+				-0.9
2,123,491	-				-0.3
2,123,491	-				+1.1
2,123,491	-				+2.1
2,123,491	-				-0.4
2,123,491	-				+0.9
2,123,491	-				-1.2
2,123,498	-				+0.3
2,123,525	-				+0.3
2,123,531	+				-0.4
2,123,613	-				+1.4
2,123,877	+				-0.2
2,123,961	+				-0.7
2,124,076	-				+0.1
2,124,169	+		Sama_1734	0.17	-0.9
2,124,206	-		Sama_1734	0.20	-1.5
2,124,551	+		Sama_1734	0.47	-1.9
2,124,559	+		Sama_1734	0.47	-1.9
2,124,715	+		Sama_1734	0.59	-0.5
2,125,047	-		Sama_1734	0.85	-1.7
2,125,097	+		Sama_1734	0.89	-1.5
2,125,221	+				+0.4
2,125,222	-				-1.4
2,125,222	-				-2.2
2,125,222	-				-1.2
2,125,315	+				-0.5
2,125,315	+				-1.2
2,125,348	+				-0.5
2,125,348	+				-0.7
2,125,367	+				-0.7
2,125,367	+				+1.8
2,125,367	+				-2.0
2,125,367	+				-0.6
2,125,367	+				+0.9
2,125,367	+				-1.2
2,125,367	+				+1.3
2,125,373	+				-0.0
2,126,082	+				-0.9