Strain Fitness in Shewanella amazonensis SB2B around Sama_1722

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,105,320	+		Sama_1719	0.70	-0.5
2,105,348	+		Sama_1719	0.73	-0.1
2,105,348	+		Sama_1719	0.73	+1.8
2,105,650	+				-0.6
2,105,702	+		Sama_1720	0.14	+1.3
2,105,702	+		Sama_1720	0.14	-0.6
2,105,840	-		Sama_1720	0.57	+0.1
2,105,840	-		Sama_1720	0.57	+0.8
2,105,953	+				+1.1
2,105,953	+				-1.2
2,105,953	+				-2.5
2,105,957	+				+0.2
2,105,957	+				+1.9
2,106,017	+		Sama_1721	0.15	+1.3
2,106,017	+		Sama_1721	0.15	+1.9
2,106,069	+		Sama_1721	0.33	+1.4
2,106,069	+		Sama_1721	0.33	+0.4
2,106,116	+		Sama_1721	0.49	+0.9
2,106,117	-		Sama_1721	0.49	+1.1
2,106,208	+		Sama_1721	0.80	+0.1
2,106,208	+		Sama_1721	0.80	-0.2
2,106,282	+				+1.4
2,106,368	+				-1.7
2,106,368	+				-0.7
2,106,452	-	ansA	Sama_1722	0.13	-0.3
2,106,715	+	ansA	Sama_1722	0.39	-1.5
2,106,716	-	ansA	Sama_1722	0.39	-0.5
2,106,924	+	ansA	Sama_1722	0.60	-0.5
2,106,924	+	ansA	Sama_1722	0.60	-2.2
2,106,924	+	ansA	Sama_1722	0.60	-0.2
2,106,924	+	ansA	Sama_1722	0.60	+2.1
2,106,924	+	ansA	Sama_1722	0.60	-0.7
2,107,025	-	ansA	Sama_1722	0.70	-0.9
2,107,048	-	ansA	Sama_1722	0.72	-1.5
2,107,099	-	ansA	Sama_1722	0.77	-0.9
2,107,174	-	ansA	Sama_1722	0.84	-1.2
2,107,368	+				-1.5
2,107,371	-				-1.9
2,107,428	+				-0.5
2,107,428	+				+1.4
2,107,433	+				+1.9
2,107,434	-				-0.9
2,107,473	-				+0.9
2,107,500	-				-0.3
2,107,515	-				-1.7
2,107,524	-				-0.9
2,107,529	+				-1.5
2,107,529	+				-0.6
2,107,529	+				-1.0
2,107,530	-				-2.5
2,107,530	-				-2.6
2,107,530	-				-2.8
2,107,530	-				-3.3
2,107,530	-				-0.2
2,107,530	-				-1.7
2,107,530	-				-1.9
2,107,532	-				-0.3
2,107,761	+		Sama_1723	0.14	-1.3
2,107,762	-		Sama_1723	0.14	-1.5
2,107,762	-		Sama_1723	0.14	-1.9
2,107,893	-		Sama_1723	0.21	-0.7
2,108,150	-		Sama_1723	0.35	-1.0
2,108,231	-		Sama_1723	0.40	-1.0
2,108,292	+		Sama_1723	0.43	-1.5
2,108,293	-		Sama_1723	0.43	-2.0