Strain Fitness in Shewanella amazonensis SB2B around Sama_1692

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,067,884	+	mdoG	Sama_1691	0.52	-1.2
2,067,925	+	mdoG	Sama_1691	0.55	-3.3
2,067,925	+	mdoG	Sama_1691	0.55	-0.5
2,067,925	+	mdoG	Sama_1691	0.55	-2.1
2,067,925	+	mdoG	Sama_1691	0.55	-2.0
2,067,925	+	mdoG	Sama_1691	0.55	-1.5
2,067,926	-	mdoG	Sama_1691	0.55	-2.7
2,067,926	-	mdoG	Sama_1691	0.55	-3.4
2,067,926	-	mdoG	Sama_1691	0.55	-0.9
2,067,926	-	mdoG	Sama_1691	0.55	-1.5
2,068,071	+	mdoG	Sama_1691	0.64	-1.9
2,068,077	+	mdoG	Sama_1691	0.64	-2.7
2,068,120	+	mdoG	Sama_1691	0.67	-2.1
2,068,120	+	mdoG	Sama_1691	0.67	-1.5
2,068,120	+	mdoG	Sama_1691	0.67	-1.9
2,068,120	+	mdoG	Sama_1691	0.67	-3.0
2,068,121	-	mdoG	Sama_1691	0.67	-2.3
2,068,121	-	mdoG	Sama_1691	0.67	-3.0
2,068,121	-	mdoG	Sama_1691	0.67	-1.7
2,068,129	+	mdoG	Sama_1691	0.67	-3.9
2,068,130	-	mdoG	Sama_1691	0.68	-3.5
2,068,150	+	mdoG	Sama_1691	0.69	-0.9
2,068,150	+	mdoG	Sama_1691	0.69	-3.2
2,068,150	+	mdoG	Sama_1691	0.69	-4.2
2,068,150	+	mdoG	Sama_1691	0.69	-1.3
2,068,150	+	mdoG	Sama_1691	0.69	-1.5
2,068,150	+	mdoG	Sama_1691	0.69	-1.7
2,068,150	+	mdoG	Sama_1691	0.69	-2.0
2,068,150	+	mdoG	Sama_1691	0.69	-0.6
2,068,188	+	mdoG	Sama_1691	0.71	-2.3
2,068,312	+	mdoG	Sama_1691	0.79	-2.7
2,068,360	-	mdoG	Sama_1691	0.82	-1.5
2,068,364	+	mdoG	Sama_1691	0.82	-1.2
2,068,432	+	mdoG	Sama_1691	0.86	-1.7
2,068,540	+				-1.7
2,068,602	+				-2.5
2,068,602	+				-4.2
2,068,639	+				-1.2
2,068,639	+				-2.6
2,068,663	+				-2.3
2,068,663	+				+0.5
2,068,663	+				-2.8
2,068,663	+				-1.9
2,068,663	+				-0.9
2,068,663	+				-1.9
2,068,663	+				-1.2
2,068,664	-				-3.3
2,068,664	-				-3.4
2,068,741	+				-2.5
2,068,794	+				-1.2
2,068,795	-				-2.8
2,068,810	+				-3.4
2,068,811	-				-3.3
2,068,811	-				-2.7
2,068,897	+				-1.9
2,068,897	+				+1.1
2,068,898	-				-3.4
2,068,938	+		Sama_1692	0.10	-1.2
2,069,018	-		Sama_1692	0.14	-0.9
2,069,079	-		Sama_1692	0.17	-0.9
2,069,251	+		Sama_1692	0.25	-2.0
2,069,252	-		Sama_1692	0.25	-2.2
2,069,264	+		Sama_1692	0.26	-3.2
2,069,264	+		Sama_1692	0.26	-2.0
2,069,264	+		Sama_1692	0.26	-1.5
2,069,264	+		Sama_1692	0.26	-1.9
2,069,264	+		Sama_1692	0.26	-1.7
2,069,267	+		Sama_1692	0.26	-1.8
2,069,268	-		Sama_1692	0.26	-2.8
2,069,394	+		Sama_1692	0.32	+0.1
2,069,394	+		Sama_1692	0.32	-2.2
2,069,395	-		Sama_1692	0.32	-1.6
2,069,462	-		Sama_1692	0.35	-2.0
2,069,550	+		Sama_1692	0.39	-2.0
2,069,659	+		Sama_1692	0.44	-1.0
2,069,661	+		Sama_1692	0.44	-2.2
2,069,661	+		Sama_1692	0.44	-2.4
2,069,661	+		Sama_1692	0.44	-2.5
2,069,662	-		Sama_1692	0.44	-2.0
2,069,735	+		Sama_1692	0.48	-2.2
2,069,768	-		Sama_1692	0.49	-3.3
2,069,889	-		Sama_1692	0.55	-1.5
2,069,889	-		Sama_1692	0.55	-2.8
2,069,954	+		Sama_1692	0.58	-2.6
2,069,954	+		Sama_1692	0.58	-3.5
2,069,954	+		Sama_1692	0.58	-1.2
2,069,954	+		Sama_1692	0.58	-2.9
2,069,955	-		Sama_1692	0.58	-2.5
2,069,955	-		Sama_1692	0.58	-2.3
2,069,955	-		Sama_1692	0.58	-3.1
2,069,955	-		Sama_1692	0.58	-2.2
2,069,958	+		Sama_1692	0.58	+0.1
2,069,958	+		Sama_1692	0.58	-1.2
2,069,958	+		Sama_1692	0.58	-1.9
2,069,958	+		Sama_1692	0.58	-2.3
2,069,959	-		Sama_1692	0.58	+0.1
2,069,959	-		Sama_1692	0.58	-2.8
2,069,969	+		Sama_1692	0.59	-1.2
2,069,969	+		Sama_1692	0.59	-1.6
2,069,970	-		Sama_1692	0.59	-2.2
2,070,041	+		Sama_1692	0.62	-1.9
2,070,041	+		Sama_1692	0.62	-1.7
2,070,041	+		Sama_1692	0.62	+2.1
2,070,041	+		Sama_1692	0.62	-3.3
2,070,049	+		Sama_1692	0.63	-1.9
2,070,050	-		Sama_1692	0.63	-1.9
2,070,057	+		Sama_1692	0.63	-1.2
2,070,070	+		Sama_1692	0.64	-0.5
2,070,070	+		Sama_1692	0.64	-1.9
2,070,169	-		Sama_1692	0.68	-0.7
2,070,193	+		Sama_1692	0.69	-1.7
2,070,202	+		Sama_1692	0.70	-1.2
2,070,202	+		Sama_1692	0.70	-1.7
2,070,202	+		Sama_1692	0.70	-2.0
2,070,202	+		Sama_1692	0.70	-3.0
2,070,202	+		Sama_1692	0.70	-4.3
2,070,203	-		Sama_1692	0.70	-1.9
2,070,302	+		Sama_1692	0.75	-2.8
2,070,344	+		Sama_1692	0.77	-1.7
2,070,345	-		Sama_1692	0.77	-1.5
2,070,542	+		Sama_1692	0.86	-1.2
2,070,542	+		Sama_1692	0.86	-2.3
2,070,542	+		Sama_1692	0.86	-2.1
2,070,543	-		Sama_1692	0.86	-1.6
2,070,543	-		Sama_1692	0.86	-2.0
2,070,545	+		Sama_1692	0.86	-1.2
2,070,580	+		Sama_1692	0.88	-2.5
2,070,632	-				-3.2
2,070,735	+				-4.0
2,070,755	+				-1.1
2,070,809	+				+1.5
2,070,810	-				-1.5
2,070,893	+				-0.6
2,070,913	+				+0.0
2,070,914	-				-0.6
2,070,955	-				-0.7
2,071,060	-				+0.4
2,071,075	+				-0.5
2,071,092	+				-0.3
2,071,092	+				-0.6
2,071,092	+				+1.1
2,071,092	+				+0.8
2,071,120	-				-2.2
2,071,150	+				-0.3
2,071,150	+				+0.5
2,071,151	-				+0.3
2,071,183	+		Sama_1693	0.10	-1.3
2,071,184	-		Sama_1693	0.10	-0.9
2,071,184	-		Sama_1693	0.10	+0.7
2,071,232	+		Sama_1693	0.12	-0.6
2,071,475	+		Sama_1693	0.21	-0.3
2,071,475	+		Sama_1693	0.21	-0.9
2,071,479	+		Sama_1693	0.22	-0.1
2,071,480	-		Sama_1693	0.22	+0.3
2,071,480	-		Sama_1693	0.22	-1.2
2,071,486	+		Sama_1693	0.22	+2.7
2,071,487	-		Sama_1693	0.22	-1.2
2,071,544	+		Sama_1693	0.24	-0.0
2,071,544	+		Sama_1693	0.24	+0.7
2,071,545	-		Sama_1693	0.24	+0.7
2,071,545	-		Sama_1693	0.24	+0.5
2,071,545	-		Sama_1693	0.24	-0.9
2,071,545	-		Sama_1693	0.24	-0.7
2,071,545	-		Sama_1693	0.24	-1.1
2,071,606	-		Sama_1693	0.26	-0.3
2,071,728	+		Sama_1693	0.31	-0.6
2,071,788	-		Sama_1693	0.33	-0.3
2,071,788	-		Sama_1693	0.33	+1.5
2,071,798	-		Sama_1693	0.34	-1.1