Strain Fitness in Shewanella amazonensis SB2B around Sama_1661

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,029,305	-		Sama_1660	0.55	+0.5
2,029,307	+		Sama_1660	0.55	-0.4
2,029,307	+		Sama_1660	0.55	+0.6
2,029,307	+		Sama_1660	0.55	-0.2
2,029,308	-		Sama_1660	0.55	-1.3
2,029,363	-		Sama_1660	0.58	+0.1
2,029,363	-		Sama_1660	0.58	+0.1
2,029,425	+		Sama_1660	0.61	-0.1
2,029,425	+		Sama_1660	0.61	-1.7
2,029,425	+		Sama_1660	0.61	+0.0
2,029,431	+		Sama_1660	0.61	+0.3
2,029,492	+		Sama_1660	0.64	-1.2
2,029,493	-		Sama_1660	0.64	-1.7
2,029,497	+		Sama_1660	0.65	+0.6
2,029,572	+		Sama_1660	0.68	+0.1
2,029,572	+		Sama_1660	0.68	-1.7
2,029,573	-		Sama_1660	0.68	+0.4
2,029,624	+		Sama_1660	0.71	+1.7
2,029,659	+		Sama_1660	0.73	+0.1
2,029,659	+		Sama_1660	0.73	+0.4
2,029,660	-		Sama_1660	0.73	-0.9
2,029,717	+		Sama_1660	0.75	-1.2
2,029,717	+		Sama_1660	0.75	-0.1
2,029,776	-		Sama_1660	0.78	+0.5
2,029,799	-		Sama_1660	0.79	-1.2
2,029,833	+		Sama_1660	0.81	-0.6
2,029,833	+		Sama_1660	0.81	-0.6
2,029,833	+		Sama_1660	0.81	-1.2
2,029,833	+		Sama_1660	0.81	-1.9
2,029,900	+		Sama_1660	0.84	-1.7
2,029,901	-		Sama_1660	0.84	-0.5
2,030,065	+				-0.0
2,030,066	-				-0.3
2,030,066	-				+0.2
2,030,066	-				+0.2
2,030,066	-				-0.9
2,030,250	+				-1.5
2,030,306	+				-1.3
2,030,306	+				-1.6
2,030,307	-				-1.5
2,030,307	-				+0.3
2,030,316	-				+0.2
2,030,333	+				-2.3
2,030,434	-				+0.8
2,030,453	+				+0.8
2,030,490	-				-0.2
2,030,531	+				-0.5
2,030,531	+				-1.7
2,030,531	+				+0.3
2,030,532	-				-0.8
2,030,582	+				+0.1
2,030,583	-				-1.1
2,030,599	-		Sama_1661	0.10	-1.5
2,030,684	+		Sama_1661	0.13	-1.9
2,030,684	+		Sama_1661	0.13	+1.8
2,030,684	+		Sama_1661	0.13	+0.4
2,030,684	+		Sama_1661	0.13	-0.2
2,030,685	-		Sama_1661	0.13	+0.3
2,030,691	-		Sama_1661	0.14	-1.9
2,030,741	-		Sama_1661	0.15	-0.7
2,030,750	+		Sama_1661	0.16	+0.6
2,030,751	-		Sama_1661	0.16	-0.9
2,030,751	-		Sama_1661	0.16	-1.1
2,030,751	-		Sama_1661	0.16	-0.5
2,030,774	+		Sama_1661	0.17	+0.7
2,030,775	-		Sama_1661	0.17	+0.5
2,030,807	+		Sama_1661	0.18	+0.8
2,030,808	-		Sama_1661	0.18	-0.6
2,030,902	+		Sama_1661	0.21	-0.5
2,030,916	+		Sama_1661	0.22	-0.9
2,030,916	+		Sama_1661	0.22	-2.0
2,030,940	-		Sama_1661	0.22	-0.8
2,030,981	+		Sama_1661	0.24	+0.5
2,030,990	+		Sama_1661	0.24	-0.1
2,030,991	-		Sama_1661	0.24	+0.1
2,031,015	-		Sama_1661	0.25	+0.1
2,031,015	-		Sama_1661	0.25	+1.1
2,031,056	+		Sama_1661	0.27	+1.3
2,031,057	-		Sama_1661	0.27	-0.9
2,031,057	-		Sama_1661	0.27	+0.4
2,031,057	-		Sama_1661	0.27	-0.3
2,031,090	-		Sama_1661	0.28	-1.1
2,031,210	-		Sama_1661	0.32	+0.2
2,031,219	-		Sama_1661	0.32	-1.3
2,031,219	-		Sama_1661	0.32	+1.1
2,031,226	-		Sama_1661	0.33	+0.1
2,031,245	+		Sama_1661	0.33	+0.4
2,031,245	+		Sama_1661	0.33	-0.4
2,031,246	-		Sama_1661	0.33	+0.7
2,031,246	-		Sama_1661	0.33	-2.3
2,031,246	-		Sama_1661	0.33	+0.6
2,031,246	-		Sama_1661	0.33	-0.5
2,031,246	-		Sama_1661	0.33	+0.5
2,031,340	+		Sama_1661	0.37	+0.6
2,031,357	+		Sama_1661	0.37	+1.3
2,031,358	-		Sama_1661	0.37	-0.3
2,031,418	+		Sama_1661	0.39	-0.1
2,031,418	+		Sama_1661	0.39	+0.6
2,031,419	-		Sama_1661	0.39	-0.5
2,031,419	-		Sama_1661	0.39	-2.0
2,031,419	-		Sama_1661	0.39	-1.3
2,031,459	+		Sama_1661	0.41	-0.8
2,031,592	-		Sama_1661	0.46	-0.0
2,031,707	+		Sama_1661	0.50	-0.7
2,031,708	-		Sama_1661	0.50	+1.8
2,031,755	+		Sama_1661	0.51	-0.5
2,031,755	+		Sama_1661	0.51	-0.5
2,031,756	-		Sama_1661	0.51	+0.5
2,031,773	+		Sama_1661	0.52	-0.7
2,031,801	-		Sama_1661	0.53	+1.1
2,031,849	-		Sama_1661	0.55	+1.0
2,031,896	+		Sama_1661	0.56	-0.9
2,031,896	+		Sama_1661	0.56	-0.5
2,031,941	+		Sama_1661	0.58	+0.1
2,031,941	+		Sama_1661	0.58	-2.5
2,031,942	-		Sama_1661	0.58	+1.0
2,032,039	+		Sama_1661	0.61	-2.6
2,032,039	+		Sama_1661	0.61	+0.1
2,032,040	-		Sama_1661	0.61	+2.1
2,032,040	-		Sama_1661	0.61	+1.1
2,032,040	-		Sama_1661	0.61	+0.4
2,032,070	+		Sama_1661	0.63	-0.9
2,032,111	-		Sama_1661	0.64	+1.5
2,032,111	-		Sama_1661	0.64	-1.5
2,032,269	+		Sama_1661	0.70	-3.1
2,032,269	+		Sama_1661	0.70	-2.0
2,032,269	+		Sama_1661	0.70	-0.3
2,032,302	-		Sama_1661	0.71	+0.7
2,032,499	+		Sama_1661	0.78	-0.8
2,032,500	-		Sama_1661	0.78	-1.7
2,032,511	-		Sama_1661	0.78	+0.5
2,032,511	-		Sama_1661	0.78	+0.0
2,032,511	-		Sama_1661	0.78	-1.5
2,032,578	+		Sama_1661	0.81	+0.1
2,032,578	+		Sama_1661	0.81	-0.2
2,032,585	-		Sama_1661	0.81	-0.6
2,032,683	-		Sama_1661	0.84	+0.1
2,032,683	-		Sama_1661	0.84	+1.9
2,032,732	-		Sama_1661	0.86	-2.0
2,032,935	+				-1.3
2,032,936	-				-0.9
2,033,063	-				+1.1
2,033,070	+				+0.3
2,033,202	+				-0.0
2,033,203	-				+0.1
2,033,205	+				+0.3
2,033,205	+				-0.7
2,033,206	-				+0.5
2,033,206	-				+0.9
2,033,236	-				-1.0
2,033,285	-				-1.0
2,033,287	+				-0.9
2,033,288	-				+0.2
2,033,322	+				+1.3
2,033,322	+				-0.8
2,033,326	+				-1.2
2,033,327	-				-0.0
2,033,405	+				-0.4
2,033,406	-				-1.5
2,033,406	-				+1.6
2,033,429	+				+0.3
2,033,429	+				+1.8
2,033,430	-				+0.6
2,033,472	+				-0.6
2,033,472	+				-0.5
2,033,472	+				-0.5
2,033,472	+				-0.6
2,033,473	-				-2.3
2,033,545	-				-1.9
2,033,549	-				-0.9
2,033,585	+				-1.7
2,033,607	+				+0.1
2,033,608	-				-0.1
2,033,669	+				-1.5
2,033,693	-				-1.2
2,033,750	+				-2.3
2,033,751	-				+0.8
2,033,752	+				-0.5
2,033,752	+				-2.8
2,033,752	+				-2.5
2,033,753	-				-1.7
2,033,753	-				-1.2
2,033,822	+		Sama_1662	0.12	+0.5
2,033,827	+		Sama_1662	0.12	-1.7
2,033,837	+		Sama_1662	0.12	-2.3
2,033,837	+		Sama_1662	0.12	-2.0
2,033,837	+		Sama_1662	0.12	-2.0
2,033,838	-		Sama_1662	0.13	-0.6
2,033,838	-		Sama_1662	0.13	+0.1
2,033,887	+		Sama_1662	0.16	-2.9
2,033,923	+		Sama_1662	0.18	-1.5
2,033,934	+		Sama_1662	0.18	-1.1
2,034,011	+		Sama_1662	0.23	-2.2
2,034,011	+		Sama_1662	0.23	-1.0
2,034,011	+		Sama_1662	0.23	-1.9
2,034,012	-		Sama_1662	0.23	-2.2
2,034,111	-		Sama_1662	0.29	-1.4
2,034,113	+		Sama_1662	0.29	-1.7
2,034,114	-		Sama_1662	0.29	-2.6
2,034,114	-		Sama_1662	0.29	-0.0