Strain Fitness in Shewanella amazonensis SB2B around Sama_1642

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
2,008,190	-				-1.5
2,008,190	-				-1.7
2,008,190	-				-0.6
2,008,230	-				-2.1
2,008,310	-				+0.1
2,008,310	-				+0.3
2,008,310	-				+0.6
2,008,319	+				+0.0
2,008,320	-				-0.2
2,008,320	-				+0.4
2,008,350	+				+0.1
2,008,350	+				+0.9
2,008,388	+		Sama_1642	0.11	-0.2
2,008,388	+		Sama_1642	0.11	-1.3
2,008,388	+		Sama_1642	0.11	-0.0
2,008,388	+		Sama_1642	0.11	-1.5
2,008,388	+		Sama_1642	0.11	+0.2
2,008,388	+		Sama_1642	0.11	+0.8
2,008,388	+		Sama_1642	0.11	-1.0
2,008,389	-		Sama_1642	0.12	-1.6
2,008,389	-		Sama_1642	0.12	-1.3
2,008,389	-		Sama_1642	0.12	-1.5
2,008,389	-		Sama_1642	0.12	-2.2
2,008,389	-		Sama_1642	0.12	+0.4
2,008,390	+		Sama_1642	0.12	-0.9
2,008,390	+		Sama_1642	0.12	-0.4
2,008,390	+		Sama_1642	0.12	-0.2
2,008,390	+		Sama_1642	0.12	-0.7
2,008,390	+		Sama_1642	0.12	+0.6
2,008,391	-		Sama_1642	0.12	-1.4
2,008,391	-		Sama_1642	0.12	-3.3
2,008,391	-		Sama_1642	0.12	+0.5
2,008,391	-		Sama_1642	0.12	+0.3
2,008,441	+		Sama_1642	0.20	+1.1
2,008,442	-		Sama_1642	0.20	-1.7
2,008,552	+		Sama_1642	0.38	-0.8
2,008,552	+		Sama_1642	0.38	-0.4
2,008,552	+		Sama_1642	0.38	+1.1
2,008,552	+		Sama_1642	0.38	-0.9
2,008,552	+		Sama_1642	0.38	+0.1
2,008,552	+		Sama_1642	0.38	-0.8
2,008,553	-		Sama_1642	0.38	-2.0
2,008,553	-		Sama_1642	0.38	-0.5
2,008,553	-		Sama_1642	0.38	+0.3
2,008,553	-		Sama_1642	0.38	-0.9
2,008,553	-		Sama_1642	0.38	-0.6
2,008,553	-		Sama_1642	0.38	-2.7
2,008,554	+		Sama_1642	0.39	-0.7
2,008,554	+		Sama_1642	0.39	-2.2
2,008,555	-		Sama_1642	0.39	+0.8
2,008,555	-		Sama_1642	0.39	-1.4
2,008,555	-		Sama_1642	0.39	-1.2
2,008,738	-		Sama_1642	0.69	+0.9
2,008,821	-		Sama_1642	0.82	-0.5
2,008,821	-		Sama_1642	0.82	+0.7
2,008,900	-				+0.6
2,008,900	-				-1.5
2,008,940	+				-0.5
2,008,941	-				-0.6
2,008,961	+				-0.6
2,008,961	+				-1.6
2,008,966	+				-1.8
2,008,966	+				-0.9
2,008,966	+				-0.6
2,009,027	+				-0.9
2,009,033	+				-0.1
2,009,080	+				-1.9
2,009,081	-				-1.2
2,009,081	-				-0.1
2,009,081	-				-0.9
2,009,103	+				-1.3
2,009,242	+		Sama_1643	0.37	-0.5
2,009,242	+		Sama_1643	0.37	-0.5
2,009,316	+		Sama_1643	0.55	-0.0
2,009,371	+		Sama_1643	0.68	-2.0
2,009,372	-		Sama_1643	0.69	+0.6
2,009,372	-		Sama_1643	0.69	+1.1
2,009,372	-		Sama_1643	0.69	-0.1
2,009,372	-		Sama_1643	0.69	+0.5
2,009,450	+		Sama_1643	0.87	-0.8
2,009,481	+				-0.9
2,009,482	-				-1.9
2,009,493	+				+1.5
2,009,494	-				-0.7
2,009,504	+				-0.0
2,009,504	+				+0.0
2,009,505	-				-1.7
2,009,505	-				-1.9
2,009,515	+				+1.1
2,009,516	-				+0.0
2,009,539	-				-1.9
2,009,544	+				-0.8
2,009,544	+				+0.8
2,009,545	-				+1.1
2,009,580	-				-1.7
2,009,590	+				-2.5
2,009,590	+				-0.9
2,009,591	-				-0.6
2,009,644	+		Sama_1644	0.11	+1.5
2,009,645	-		Sama_1644	0.11	-0.9
2,009,645	-		Sama_1644	0.11	+0.8
2,009,645	-		Sama_1644	0.11	-0.1
2,009,647	+		Sama_1644	0.11	+0.1
2,009,647	+		Sama_1644	0.11	-0.2
2,009,647	+		Sama_1644	0.11	+0.2
2,009,647	+		Sama_1644	0.11	-0.6
2,009,647	+		Sama_1644	0.11	+0.7
2,009,648	-		Sama_1644	0.11	-2.2
2,009,648	-		Sama_1644	0.11	+0.5
2,009,650	+		Sama_1644	0.12	+0.3
2,009,650	+		Sama_1644	0.12	+1.1
2,009,650	+		Sama_1644	0.12	-1.9
2,009,650	+		Sama_1644	0.12	-0.1
2,009,650	+		Sama_1644	0.12	+0.3
2,009,650	+		Sama_1644	0.12	-0.2
2,009,650	+		Sama_1644	0.12	-0.1
2,009,650	+		Sama_1644	0.12	-0.3
2,009,651	-		Sama_1644	0.12	-0.8
2,009,651	-		Sama_1644	0.12	+0.1
2,009,651	-		Sama_1644	0.12	+0.7
2,009,651	-		Sama_1644	0.12	-1.3
2,009,651	-		Sama_1644	0.12	-1.7
2,009,651	-		Sama_1644	0.12	-0.1
2,009,651	-		Sama_1644	0.12	+2.1
2,009,651	-		Sama_1644	0.12	-0.6
2,009,651	-		Sama_1644	0.12	-0.5
2,009,651	-		Sama_1644	0.12	+0.2
2,009,651	-		Sama_1644	0.12	+0.2
2,009,655	-		Sama_1644	0.12	+0.2
2,009,706	+		Sama_1644	0.16	+0.4
2,009,707	-		Sama_1644	0.16	+0.4
2,009,738	+		Sama_1644	0.19	+0.1
2,009,740	+		Sama_1644	0.19	+0.1
2,009,740	+		Sama_1644	0.19	+0.8
2,009,740	+		Sama_1644	0.19	-0.4
2,009,741	-		Sama_1644	0.19	-0.3
2,009,797	+		Sama_1644	0.24	+0.1
2,009,798	-		Sama_1644	0.24	+0.2
2,009,909	+		Sama_1644	0.33	+0.7
2,009,929	+		Sama_1644	0.35	-0.9
2,009,929	+		Sama_1644	0.35	+1.0
2,009,929	+		Sama_1644	0.35	+0.9