Strain Fitness in Shewanella amazonensis SB2B around Sama_1454

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,763,563	-				-1.8
1,763,624	+				-0.8
1,763,624	+				-1.2
1,763,624	+				+0.9
1,763,624	+				-3.4
1,763,624	+				-2.7
1,763,624	+				+1.2
1,763,624	+				-0.1
1,763,625	-				+0.5
1,763,625	-				-0.5
1,763,625	-				+0.0
1,763,625	-				+0.9
1,763,656	+		Sama_1452	0.11	-1.0
1,763,656	+		Sama_1452	0.11	-0.4
1,763,656	+		Sama_1452	0.11	-1.4
1,763,657	-		Sama_1452	0.12	-3.1
1,763,657	-		Sama_1452	0.12	+0.2
1,763,657	-		Sama_1452	0.12	-0.7
1,763,671	-		Sama_1452	0.17	-1.4
1,763,671	-		Sama_1452	0.17	-1.8
1,763,674	+		Sama_1452	0.18	-0.3
1,763,674	+		Sama_1452	0.18	-2.9
1,763,674	+		Sama_1452	0.18	-0.9
1,763,675	-		Sama_1452	0.19	-2.1
1,763,675	-		Sama_1452	0.19	+0.6
1,763,697	+		Sama_1452	0.27	-2.0
1,763,759	+		Sama_1452	0.50	-1.8
1,763,759	+		Sama_1452	0.50	-1.4
1,763,770	+		Sama_1452	0.55	-0.7
1,763,770	+		Sama_1452	0.55	-0.3
1,763,771	-		Sama_1452	0.55	+0.5
1,763,868	+				-0.7
1,763,887	+				+0.4
1,764,001	+		Sama_1453	0.17	+0.9
1,764,005	+		Sama_1453	0.17	+0.6
1,764,005	+		Sama_1453	0.17	-1.1
1,764,006	-		Sama_1453	0.17	-1.5
1,764,006	-		Sama_1453	0.17	-2.0
1,764,067	+		Sama_1453	0.27	-2.0
1,764,067	+		Sama_1453	0.27	-0.4
1,764,067	+		Sama_1453	0.27	+0.2
1,764,068	-		Sama_1453	0.27	-0.4
1,764,068	-		Sama_1453	0.27	-0.4
1,764,121	+		Sama_1453	0.35	-0.4
1,764,121	+		Sama_1453	0.35	-1.1
1,764,121	+		Sama_1453	0.35	-1.2
1,764,122	-		Sama_1453	0.35	-2.8
1,764,124	+		Sama_1453	0.36	-2.2
1,764,124	+		Sama_1453	0.36	-1.1
1,764,124	+		Sama_1453	0.36	-0.8
1,764,125	-		Sama_1453	0.36	-1.6
1,764,125	-		Sama_1453	0.36	-2.1
1,764,142	+		Sama_1453	0.38	-1.1
1,764,142	+		Sama_1453	0.38	-0.7
1,764,143	-		Sama_1453	0.39	-0.0
1,764,183	+		Sama_1453	0.45	-3.1
1,764,183	+		Sama_1453	0.45	-1.0
1,764,183	+		Sama_1453	0.45	-0.5
1,764,183	+		Sama_1453	0.45	-1.4
1,764,183	+		Sama_1453	0.45	-0.6
1,764,184	-		Sama_1453	0.45	-0.1
1,764,204	+		Sama_1453	0.48	-0.8
1,764,225	+		Sama_1453	0.51	+0.2
1,764,226	-		Sama_1453	0.51	-0.7
1,764,276	+		Sama_1453	0.59	-0.3
1,764,373	+		Sama_1453	0.74	-0.9
1,764,373	+		Sama_1453	0.74	+0.3
1,764,374	-		Sama_1453	0.74	-0.4
1,764,386	+		Sama_1453	0.76	-2.4
1,764,386	+		Sama_1453	0.76	+0.6
1,764,386	+		Sama_1453	0.76	+1.1
1,764,386	+		Sama_1453	0.76	-0.8
1,764,386	+		Sama_1453	0.76	-0.6
1,764,386	+		Sama_1453	0.76	-1.1
1,764,386	+		Sama_1453	0.76	-1.2
1,764,386	+		Sama_1453	0.76	-0.6
1,764,387	-		Sama_1453	0.76	-0.5
1,764,387	-		Sama_1453	0.76	-2.2
1,764,403	+		Sama_1453	0.79	-0.8
1,764,403	+		Sama_1453	0.79	+0.2
1,764,404	-		Sama_1453	0.79	-0.5
1,764,404	-		Sama_1453	0.79	-2.1
1,764,409	+		Sama_1453	0.80	-1.8
1,764,455	-		Sama_1453	0.87	-1.6
1,764,486	-				-2.0
1,764,531	+				+0.1
1,764,689	+		Sama_1454	0.15	+0.2
1,764,852	+		Sama_1454	0.31	-1.8
1,764,853	-		Sama_1454	0.31	-3.2
1,764,865	+		Sama_1454	0.32	-1.8
1,764,865	+		Sama_1454	0.32	-2.2
1,764,866	-		Sama_1454	0.32	-3.7
1,764,895	-		Sama_1454	0.35	-3.7
1,765,089	+		Sama_1454	0.54	-1.8
1,765,152	+		Sama_1454	0.60	-3.2
1,765,153	-		Sama_1454	0.60	-1.1
1,765,261	+		Sama_1454	0.70	-1.7
1,765,261	+		Sama_1454	0.70	-2.4
1,765,262	-		Sama_1454	0.70	-2.3
1,765,302	+		Sama_1454	0.74	-4.1
1,765,302	+		Sama_1454	0.74	-0.8
1,765,395	+		Sama_1454	0.83	-2.4
1,765,401	+		Sama_1454	0.84	-1.8
1,765,401	+		Sama_1454	0.84	-3.5
1,765,401	+		Sama_1454	0.84	-3.6
1,765,401	+		Sama_1454	0.84	-2.1
1,765,401	+		Sama_1454	0.84	-3.1
1,765,402	-		Sama_1454	0.84	-1.4
1,765,468	-				-2.2
1,765,542	+				-2.8
1,765,542	+				-1.8
1,765,543	-				-2.0
1,765,546	+				-0.1
1,765,594	+				-2.4
1,765,628	+				-1.1
1,765,628	+				+1.8
1,765,628	+				-1.2
1,765,628	+				+1.9
1,765,628	+				-0.8
1,765,629	-				+0.4
1,765,629	-				-0.8
1,765,629	-				-0.0
1,765,629	-				-0.4
1,765,698	+				-1.6
1,765,698	+				+0.1
1,765,698	+				-1.3
1,765,698	+				-1.0
1,765,699	-				-0.4
1,765,699	-				+0.5
1,765,699	-				+0.1
1,765,701	+				-0.4
1,765,701	+				+0.8
1,765,702	-				+2.2
1,765,740	+		Sama_1455	0.13	+0.6
1,765,740	+		Sama_1455	0.13	+0.7
1,765,740	+		Sama_1455	0.13	+0.3
1,765,740	+		Sama_1455	0.13	+0.6
1,765,740	+		Sama_1455	0.13	+0.3
1,765,740	+		Sama_1455	0.13	+0.4
1,765,740	+		Sama_1455	0.13	-1.1
1,765,740	+		Sama_1455	0.13	+0.2
1,765,741	-		Sama_1455	0.13	+0.3
1,765,741	-		Sama_1455	0.13	+0.8
1,765,741	-		Sama_1455	0.13	-1.6
1,765,741	-		Sama_1455	0.13	+0.5
1,765,741	-		Sama_1455	0.13	+0.1
1,765,741	-		Sama_1455	0.13	-0.4
1,765,741	-		Sama_1455	0.13	+0.7
1,765,796	+		Sama_1455	0.20	+0.6
1,765,831	-		Sama_1455	0.24	-0.7
1,765,911	+		Sama_1455	0.33	+0.1
1,765,948	+		Sama_1455	0.38	+0.2
1,765,948	+		Sama_1455	0.38	+0.0
1,765,948	+		Sama_1455	0.38	+0.9
1,765,948	+		Sama_1455	0.38	-0.1
1,765,949	-		Sama_1455	0.38	-0.1
1,765,949	-		Sama_1455	0.38	+0.3
1,766,003	+		Sama_1455	0.44	+0.8
1,766,006	+		Sama_1455	0.44	+0.9
1,766,057	+		Sama_1455	0.50	+0.5
1,766,058	-		Sama_1455	0.51	+0.2
1,766,168	+		Sama_1455	0.63	-2.2
1,766,168	+		Sama_1455	0.63	+0.7
1,766,169	-		Sama_1455	0.64	-1.5
1,766,169	-		Sama_1455	0.64	+0.7
1,766,169	-		Sama_1455	0.64	+1.0
1,766,169	-		Sama_1455	0.64	+1.2
1,766,192	+		Sama_1455	0.66	-1.4
1,766,192	+		Sama_1455	0.66	+0.2
1,766,193	-		Sama_1455	0.66	-1.7
1,766,205	+		Sama_1455	0.68	-0.7
1,766,205	+		Sama_1455	0.68	+1.9
1,766,427	+				-2.4
1,766,427	+				-0.2
1,766,509	+				-0.8
1,766,509	+				-1.1
1,766,530	-				+0.5
1,766,530	-				+2.2
1,766,541	-				-0.7
1,766,547	-				-1.1
1,766,547	-				-0.5
1,766,547	-				-0.0
1,766,563	+				-1.1
1,766,563	+				+0.2
1,766,563	+				-0.4
1,766,564	-				+1.6
1,766,564	-				-0.2
1,766,564	-				+1.0
1,766,564	-				+0.4