Strain Fitness in Shewanella amazonensis SB2B around Sama_1449

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,758,587	-		Sama_1447	0.83	+0.8
1,758,624	+		Sama_1447	0.85	-0.9
1,758,624	+		Sama_1447	0.85	-0.4
1,758,633	+		Sama_1447	0.85	-1.4
1,758,633	+		Sama_1447	0.85	+0.2
1,758,634	-		Sama_1447	0.85	+0.8
1,758,713	-				-0.6
1,758,766	+				+0.3
1,758,766	+				-0.3
1,758,766	+				+0.2
1,758,767	-				-0.8
1,758,767	-				+0.7
1,758,767	-				-0.2
1,758,767	-				-0.8
1,758,768	+				-0.7
1,758,768	+				-1.6
1,758,768	+				+0.7
1,758,769	-				+0.5
1,758,769	-				-0.1
1,758,769	-				-0.4
1,758,769	-				+0.5
1,758,879	+				+3.0
1,758,880	-				-0.9
1,758,889	+				+0.2
1,758,889	+				+0.5
1,758,909	+				-0.9
1,758,990	-				-1.2
1,758,994	+				-1.4
1,758,994	+				+1.2
1,758,994	+				-0.3
1,758,995	-				-0.4
1,758,995	-				-0.8
1,759,064	+				-1.6
1,759,064	+				-2.4
1,759,065	-				-1.0
1,759,106	-				-0.6
1,759,137	+		Sama_1448	0.17	-0.8
1,759,138	-		Sama_1448	0.17	-3.5
1,759,138	-		Sama_1448	0.17	-2.2
1,759,138	-		Sama_1448	0.17	-2.9
1,759,201	+		Sama_1448	0.35	-1.0
1,759,217	+		Sama_1448	0.40	-1.1
1,759,217	+		Sama_1448	0.40	-4.1
1,759,217	+		Sama_1448	0.40	-0.1
1,759,268	+		Sama_1448	0.54	-2.1
1,759,274	+		Sama_1448	0.56	-0.6
1,759,274	+		Sama_1448	0.56	-1.4
1,759,274	+		Sama_1448	0.56	-0.4
1,759,274	+		Sama_1448	0.56	-1.6
1,759,368	+		Sama_1448	0.82	-0.4
1,759,369	-		Sama_1448	0.82	+0.2
1,759,369	-		Sama_1448	0.82	-2.2
1,759,441	+				+1.2
1,759,441	+				-2.3
1,759,525	+				+3.7
1,759,557	+		Sama_1449	0.12	-0.4
1,759,557	+		Sama_1449	0.12	+1.3
1,759,558	-		Sama_1449	0.12	-1.0
1,759,575	-		Sama_1449	0.13	-0.8
1,759,575	-		Sama_1449	0.13	-2.2
1,759,577	-		Sama_1449	0.14	-1.4
1,759,577	-		Sama_1449	0.14	+0.2
1,759,733	+		Sama_1449	0.29	-0.7
1,759,733	+		Sama_1449	0.29	+0.2
1,759,733	+		Sama_1449	0.29	-0.9
1,759,734	-		Sama_1449	0.29	-0.2
1,759,734	-		Sama_1449	0.29	-2.8
1,759,734	-		Sama_1449	0.29	+0.7
1,759,734	-		Sama_1449	0.29	-2.9
1,759,735	+		Sama_1449	0.30	-0.4
1,759,735	+		Sama_1449	0.30	-0.4
1,759,735	+		Sama_1449	0.30	-1.1
1,759,735	+		Sama_1449	0.30	-2.1
1,759,735	+		Sama_1449	0.30	-0.6
1,759,819	+		Sama_1449	0.38	+1.2
1,759,827	-		Sama_1449	0.39	+0.8
1,759,839	+		Sama_1449	0.40	-1.8
1,759,839	+		Sama_1449	0.40	-1.5
1,759,839	+		Sama_1449	0.40	-1.1
1,759,839	+		Sama_1449	0.40	-0.2
1,759,839	+		Sama_1449	0.40	-0.8
1,759,839	+		Sama_1449	0.40	-1.0
1,759,839	+		Sama_1449	0.40	-0.2
1,759,840	-		Sama_1449	0.40	-0.9
1,759,840	-		Sama_1449	0.40	+0.1
1,759,840	-		Sama_1449	0.40	-1.4
1,759,840	-		Sama_1449	0.40	-0.0
1,759,840	-		Sama_1449	0.40	-0.8
1,759,840	-		Sama_1449	0.40	-1.4
1,759,840	-		Sama_1449	0.40	-0.6
1,759,936	+		Sama_1449	0.50	-0.4
1,760,072	+		Sama_1449	0.64	-0.9
1,760,323	+		Sama_1449	0.89	-1.8
1,760,323	+		Sama_1449	0.89	-1.9
1,760,324	-		Sama_1449	0.89	-0.6
1,760,324	-		Sama_1449	0.89	-1.0
1,760,327	-		Sama_1449	0.89	-2.3
1,760,327	-		Sama_1449	0.89	-0.8
1,760,327	-		Sama_1449	0.89	-2.1
1,760,398	-				-0.0
1,760,429	+				-0.8
1,760,446	-				-0.2
1,760,468	+				+1.1
1,760,469	-				-2.8
1,760,498	-				-0.8
1,760,498	-				-0.0
1,760,525	+				-2.2
1,760,530	+				+1.2
1,760,530	+				+0.8
1,760,530	+				+1.2
1,760,530	+				-0.1
1,760,530	+				+0.8
1,760,531	-				-0.4
1,760,531	-				+0.5
1,760,563	-				-1.7
1,760,605	+				-1.2
1,760,605	+				-0.4
1,760,643	+		Sama_1450	0.15	-2.7
1,760,712	+		Sama_1450	0.31	-0.7
1,760,712	+		Sama_1450	0.31	-0.4
1,760,712	+		Sama_1450	0.31	+2.0
1,760,713	-		Sama_1450	0.31	-0.1
1,760,716	+		Sama_1450	0.32	-0.6
1,760,716	+		Sama_1450	0.32	+0.7
1,760,716	+		Sama_1450	0.32	-2.4
1,760,722	+		Sama_1450	0.33	-0.3
1,760,722	+		Sama_1450	0.33	-0.1
1,760,722	+		Sama_1450	0.33	-2.0
1,760,722	+		Sama_1450	0.33	+0.2
1,760,723	-		Sama_1450	0.34	-1.0
1,760,723	-		Sama_1450	0.34	-0.5
1,760,842	+		Sama_1450	0.62	-0.8
1,760,902	+		Sama_1450	0.76	-1.3
1,760,914	+		Sama_1450	0.79	-0.1
1,760,915	-		Sama_1450	0.79	-1.1
1,760,975	+				+0.9
1,760,975	+				-0.6
1,760,976	-				-1.9
1,760,999	+				+0.2
1,760,999	+				-0.4
1,760,999	+				-0.9
1,760,999	+				+0.7
1,760,999	+				-1.4
1,761,000	-				+1.2
1,761,022	+				+0.7
1,761,054	+				+0.8
1,761,054	+				-2.2
1,761,055	-				+1.5
1,761,055	-				-1.8
1,761,068	+				-0.3
1,761,068	+				+0.4
1,761,076	-				-0.8
1,761,076	-				+1.3
1,761,081	-				+1.7
1,761,081	-				+1.4
1,761,113	+				+1.5
1,761,114	-				+0.5
1,761,126	+				+1.4
1,761,127	-				-2.1
1,761,183	-				+0.8
1,761,198	+				-0.1
1,761,208	+				-0.1
1,761,208	+				-2.6
1,761,208	+				+0.8
1,761,208	+				+0.5
1,761,208	+				+1.5
1,761,209	-				+0.5
1,761,311	-				-0.8
1,761,322	-				+0.9
1,761,427	+				+0.5
1,761,428	-				+0.8