Strain Fitness in Shewanella amazonensis SB2B around Sama_1378

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,668,828	-		Sama_1377	0.18	+0.2
1,668,863	+		Sama_1377	0.21	+0.3
1,668,887	+		Sama_1377	0.23	-0.7
1,668,887	+		Sama_1377	0.23	-1.1
1,668,887	+		Sama_1377	0.23	-0.0
1,668,888	-		Sama_1377	0.24	+0.1
1,668,888	-		Sama_1377	0.24	+0.2
1,668,888	-		Sama_1377	0.24	-0.1
1,668,978	+		Sama_1377	0.31	-1.0
1,668,978	+		Sama_1377	0.31	-1.6
1,668,978	+		Sama_1377	0.31	+0.9
1,669,053	+		Sama_1377	0.38	+0.3
1,669,054	-		Sama_1377	0.38	+0.3
1,669,061	+		Sama_1377	0.39	+0.2
1,669,079	+		Sama_1377	0.40	-1.9
1,669,148	+		Sama_1377	0.46	-0.7
1,669,241	+		Sama_1377	0.54	+0.1
1,669,242	-		Sama_1377	0.54	-0.7
1,669,304	+		Sama_1377	0.59	+0.7
1,669,305	-		Sama_1377	0.60	-0.6
1,669,337	+		Sama_1377	0.62	+1.1
1,669,360	+		Sama_1377	0.64	+0.8
1,669,361	-		Sama_1377	0.64	+1.9
1,669,412	+		Sama_1377	0.69	-1.1
1,669,413	-		Sama_1377	0.69	+0.3
1,669,504	+		Sama_1377	0.77	+1.3
1,669,505	-		Sama_1377	0.77	-1.5
1,669,520	+		Sama_1377	0.78	-0.2
1,669,638	+		Sama_1377	0.88	-1.6
1,669,638	+		Sama_1377	0.88	-0.2
1,669,638	+		Sama_1377	0.88	+1.5
1,669,639	-		Sama_1377	0.88	-0.8
1,669,639	-		Sama_1377	0.88	-2.6
1,669,684	+				+0.7
1,669,818	+				-0.7
1,669,819	-				-2.4
1,669,847	-				+0.6
1,669,935	+		Sama_1378	0.14	+0.3
1,669,951	+		Sama_1378	0.16	+0.0
1,669,951	+		Sama_1378	0.16	+0.5
1,669,951	+		Sama_1378	0.16	-0.6
1,669,951	+		Sama_1378	0.16	-0.1
1,669,951	+		Sama_1378	0.16	-1.3
1,669,952	-		Sama_1378	0.16	+1.6
1,670,135	+		Sama_1378	0.40	-0.7
1,670,135	+		Sama_1378	0.40	-1.0
1,670,203	-		Sama_1378	0.49	-1.3
1,670,317	+		Sama_1378	0.63	+0.7
1,670,318	-		Sama_1378	0.64	-1.5
1,670,473	+		Sama_1378	0.84	-0.7
1,670,474	-		Sama_1378	0.84	+1.3
1,670,622	+				-0.2
1,670,622	+				-0.3
1,670,623	-				+1.6
1,670,623	-				-0.1
1,670,623	-				-0.5
1,670,655	-				-0.3
1,670,690	+				+0.3
1,670,690	+				+0.7
1,670,690	+				-1.5
1,670,690	+				+0.2
1,670,690	+				+1.3
1,670,690	+				+0.1
1,670,691	-				-0.1
1,670,691	-				+1.7
1,670,790	+		Sama_1379	0.14	+0.5
1,670,790	+		Sama_1379	0.14	-1.1
1,670,790	+		Sama_1379	0.14	+0.3
1,670,790	+		Sama_1379	0.14	+1.0
1,670,790	+		Sama_1379	0.14	+0.2
1,670,790	+		Sama_1379	0.14	-1.5
1,670,790	+		Sama_1379	0.14	+0.9
1,670,790	+		Sama_1379	0.14	+1.5
1,670,790	+		Sama_1379	0.14	-0.3
1,670,790	+		Sama_1379	0.14	+0.4
1,670,790	+		Sama_1379	0.14	+0.9
1,670,790	+		Sama_1379	0.14	-0.8
1,670,790	+		Sama_1379	0.14	+0.6
1,670,790	+		Sama_1379	0.14	+0.6
1,670,790	+		Sama_1379	0.14	+1.3
1,670,791	-		Sama_1379	0.14	+0.7
1,670,791	-		Sama_1379	0.14	+0.9
1,670,791	-		Sama_1379	0.14	+0.8
1,670,791	-		Sama_1379	0.14	-0.7
1,670,791	-		Sama_1379	0.14	+1.0
1,670,863	+		Sama_1379	0.20	-0.1
1,670,942	-		Sama_1379	0.27	-0.7
1,670,946	+		Sama_1379	0.28	+0.1
1,670,947	-		Sama_1379	0.28	-0.7
1,670,970	+		Sama_1379	0.30	+0.5
1,670,970	+		Sama_1379	0.30	-0.8
1,670,970	+		Sama_1379	0.30	-0.3
1,670,970	+		Sama_1379	0.30	+0.9
1,670,971	-		Sama_1379	0.30	+0.1
1,670,971	-		Sama_1379	0.30	+0.1
1,670,971	-		Sama_1379	0.30	-0.3
1,670,993	+		Sama_1379	0.32	+0.4
1,670,993	+		Sama_1379	0.32	-1.7
1,670,993	+		Sama_1379	0.32	-0.9
1,670,993	+		Sama_1379	0.32	-0.6
1,670,993	+		Sama_1379	0.32	-1.5
1,670,994	-		Sama_1379	0.32	-0.1
1,670,994	-		Sama_1379	0.32	+2.1
1,670,994	-		Sama_1379	0.32	-0.1
1,671,124	-		Sama_1379	0.44	-0.1
1,671,190	+		Sama_1379	0.50	+0.1
1,671,212	+		Sama_1379	0.52	-0.9
1,671,212	+		Sama_1379	0.52	-0.1
1,671,217	+		Sama_1379	0.52	-0.2
1,671,348	+		Sama_1379	0.64	-1.5
1,671,349	-		Sama_1379	0.64	+1.5
1,671,366	+		Sama_1379	0.66	-1.0
1,671,366	+		Sama_1379	0.66	-0.1
1,671,366	+		Sama_1379	0.66	+0.6
1,671,366	+		Sama_1379	0.66	-2.1
1,671,449	+		Sama_1379	0.73	-0.3
1,671,450	-		Sama_1379	0.73	-0.7
1,671,450	-		Sama_1379	0.73	-0.3
1,671,450	-		Sama_1379	0.73	-1.1
1,671,450	-		Sama_1379	0.73	-0.1
1,671,450	-		Sama_1379	0.73	+0.5
1,671,450	-		Sama_1379	0.73	-0.7
1,671,518	+		Sama_1379	0.79	-0.5
1,671,518	+		Sama_1379	0.79	-0.1
1,671,518	+		Sama_1379	0.79	-0.3
1,671,518	+		Sama_1379	0.79	-3.2
1,671,518	+		Sama_1379	0.79	-1.1
1,671,518	+		Sama_1379	0.79	+0.7
1,671,518	+		Sama_1379	0.79	-0.3
1,671,518	+		Sama_1379	0.79	-0.2
1,671,518	+		Sama_1379	0.79	-0.1
1,671,518	+		Sama_1379	0.79	-1.1
1,671,518	+		Sama_1379	0.79	+0.0
1,671,518	+		Sama_1379	0.79	-0.9
1,671,519	-		Sama_1379	0.80	+0.4
1,671,519	-		Sama_1379	0.80	-1.1
1,671,519	-		Sama_1379	0.80	+0.3
1,671,519	-		Sama_1379	0.80	-1.4
1,671,519	-		Sama_1379	0.80	+0.2
1,671,519	-		Sama_1379	0.80	+2.2
1,671,519	-		Sama_1379	0.80	+0.1
1,671,519	-		Sama_1379	0.80	+0.1
1,671,519	-		Sama_1379	0.80	+1.4