Strain Fitness in Shewanella amazonensis SB2B around Sama_1255

Experiment: Paraquat dichloride 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03125 mg/ml
1,542,607	+				-3.7
1,542,607	+				-1.5
1,542,607	+				-1.7
1,542,607	+				-3.2
1,542,608	-				-2.3
1,542,608	-				-1.0
1,542,608	-				-1.2
1,542,650	+				-1.7
1,542,656	+				-2.0
1,542,705	+				-1.0
1,542,712	+				-0.7
1,542,712	+				-2.0
1,542,712	+				-0.2
1,542,857	+		Sama_1254	0.21	-2.0
1,542,858	-		Sama_1254	0.21	+1.6
1,542,938	+		Sama_1254	0.31	-1.2
1,542,982	+		Sama_1254	0.37	-0.2
1,543,190	+		Sama_1254	0.63	-1.7
1,543,301	+		Sama_1254	0.77	-2.5
1,543,338	-		Sama_1254	0.82	-1.2
1,543,338	-		Sama_1254	0.82	-1.0
1,543,487	+				-0.7
1,543,563	+				-1.5
1,543,564	-				-0.2
1,543,599	+				-2.7
1,543,863	+		Sama_1255	0.28	-0.2
1,543,884	+		Sama_1255	0.30	-3.0
1,544,039	+		Sama_1255	0.41	+0.3
1,544,095	+		Sama_1255	0.46	-1.0
1,544,095	+		Sama_1255	0.46	-2.1
1,544,096	-		Sama_1255	0.46	-1.5
1,544,302	+		Sama_1255	0.61	-1.2
1,544,405	+		Sama_1255	0.68	-0.2
1,544,544	+		Sama_1255	0.79	-1.0
1,544,555	+		Sama_1255	0.79	-1.5
1,544,677	-		Sama_1255	0.88	-0.2
1,544,839	+				-1.8
1,544,839	+				-2.5
1,545,095	+		Sama_1256	0.50	-0.7
1,545,161	+		Sama_1256	0.62	+0.3
1,545,212	+		Sama_1256	0.72	-1.3
1,545,320	+				-2.0
1,545,357	+				-0.3
1,545,369	+				-2.3
1,545,639	+		Sama_1257	0.66	-0.7
1,545,741	+				-0.3
1,545,775	+				-1.5
1,545,779	+				-1.8
1,545,780	-				-1.7
1,545,793	+				-2.4
1,545,796	+				-0.5
1,545,796	+				-2.0
1,545,796	+				-1.5
1,545,796	+				-2.1
1,545,800	+				-2.3